| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2657 |
|---|
| Symbol | |
|---|
| ID | 5159549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 2916855 |
|---|
| End bp | 2918309 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640554583 |
|---|
| Product | lytic transglycosylase, catalytic |
|---|
| Protein accession | YP_001235767 |
|---|
| Protein GI | 148261640 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.142351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCCGGG CGAGGCTGCC GGCGCAACGG AGCGGCTGGC CGCCCCAACC CCCCCGGGCG
GATGCCACGC GCCGCGCCGA ACTGCGATGG GAGACACGTG TTGAACGCTG CGTTCCACCC
CGCCCCGCTC CGCGCGAGCC GTCCGCGATG ACCGCGAAGC TGCGACACGC CTGGCGATTC
GCCGGACTCT CCGCCCTCGC CCTGCTGGCC GCCTGTTCGA CCCGGCAGGC CAATCTGAGC
CCTAGCCAGC TCGCGGCGCG CTACGCCGCC AACGCGCCGG CCGATTACCG CCCGCCGGGA
CCGCCCGGCG ACCCGTGGGG GCCGTATATC GAGCAGGCCT CGGCGCGGTT CGACGTGCCG
GCGAAATGGA TCCGCGCGGT GATGCATGTC GAGTCGGGCG GGCACGAATA CATGAACGGG
CATCTCACCG TCTCCAGCGC CGGGGCGATG GGGCTGATGC AGCTGGAGCC CGAGACCTAC
CAGGAGATGG CGGCGCGCTA CGGGCTGGGG CCGGACCCGT TCAACCCGCT CGACAACATC
ATGGCGGGGA CGGCGTATAT CCACCAGATG TACGAGATCT ACGGCTCGCC GGGCTTCCTC
GCCGCGTATA ACGCGGGGCC GGGGCGGCTC GACGACTATC TCGACTACCG CCAGCCGCTG
CCGGCGCAGA CGCGGCACTA TGTGGCGATG ATCGCGCCGC AGATCGCCGG CGTGTATCCG
GCCGGGCCGT CCGAGGCGGA GGCGGTGGCG ATGAACCAGC TGCCGACGCG GATTCCGGCG
GGCATCCGCC CGGCGGACGA TGGCGGCGAG ACCTCGCGGC TGAACCAGGC GCAGATCGCG
ATGCGGCAGA CGGCGCCGAC GCTGCCCGCG CCATCGCCCT CGCCGGCGCC GGTGCGCGTG
GCCGCGCTCG CGCCGCCCGC CGCGGTGGAG CCGCAGGCCG TGCCGGTGGC GGTGGCCACG
CGGTCCATGC CGCCGGTGCG CCGGCCGCAC GGGTTCGGCG GGTTCTCGCT GATTCCCTCG
GCCGAGGCGG CGACGCCGGT GATGGACGGG CCGCCGGTGA CCCGGCAGGC GACGCCTTCC
ATCCGCACCG CGAGCGCGCT GGCGCCGCGC GCGGTGGCGG CGCCGCGCCC GGCGACGATG
CGCCTCGCGG CGGCGCGGGC GCCGGTTGCC GCAGCACCGC AGCCGACGCG GCAGCTCGGC
GGCGGGCGCT GGAGCATCCA GGTCGGCGCC TACGACACCC CGGCGCACGC CAAGGCGGCG
CTCGGCATCG CCGAGCTGAG CGCGGTGGCC ATGCTGATGA AGGGGCAGCC GGTGGTCGAG
CCGATCTCGA CCGCGCGGGG CCGGTTCTAC CGGGCGCGGT TCGTCAACCT GCCGCACAGC
GCCGCGGTGA GCGCCTGCCG GCAGTTGCAG GGCGGGCCGA CCGGCTGCGC GGTGCTGTCG
CCCGACGCGG GTTAA
|
|---|
| Protein sequence | MCRARLPAQR SGWPPQPPRA DATRRAELRW ETRVERCVPP RPAPREPSAM TAKLRHAWRF
AGLSALALLA ACSTRQANLS PSQLAARYAA NAPADYRPPG PPGDPWGPYI EQASARFDVP
AKWIRAVMHV ESGGHEYMNG HLTVSSAGAM GLMQLEPETY QEMAARYGLG PDPFNPLDNI
MAGTAYIHQM YEIYGSPGFL AAYNAGPGRL DDYLDYRQPL PAQTRHYVAM IAPQIAGVYP
AGPSEAEAVA MNQLPTRIPA GIRPADDGGE TSRLNQAQIA MRQTAPTLPA PSPSPAPVRV
AALAPPAAVE PQAVPVAVAT RSMPPVRRPH GFGGFSLIPS AEAATPVMDG PPVTRQATPS
IRTASALAPR AVAAPRPATM RLAAARAPVA AAPQPTRQLG GGRWSIQVGA YDTPAHAKAA
LGIAELSAVA MLMKGQPVVE PISTARGRFY RARFVNLPHS AAVSACRQLQ GGPTGCAVLS
PDAG
|
|---|
| |