| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2588 |
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| Symbol | |
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| ID | 5162481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 2842275 |
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| End bp | 2843330 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640554513 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001235698 |
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| Protein GI | 148261571 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACATA CCGCTTACGA AGGTTTCGCC GCCCGACCTG CCGAGTCCGT CTTTGGCAAC
GGGGCACAGG CCCATACCGG CGGTGCGGGC GGCAGAGCGG CAGCGGACCG GGTGATGGTC
GGCCAGTCTC CGGCGATGCT CAGGACATTC GAGCTGATCC GGAGATTCGC ACCTGTCGAT
GCGCCAGTGC TCATCACCGG GGAGACCGGC ACGGGAAAGG AACTCGCCGC CCGCGCGATC
CATGACCGGT CAAACGCCTG CGACGGCCGT TTCGTGGCGA TCAACTGCGC CGCCCTGCCC
GCCAGCCTGA TTGCCTCGGA ACTGTTCGGC TACGAGAAAG GTGCCTTTAC CGGGGCCGCC
GCCCGGCGGG TCGGGCTGAT CGAGATGGCC GATGGCGGCT CTCTCTTCCT GGACGAGATC
GGCGACCTGC CTCTCGAATT GCAGGGTCAT CTGCTGCGAT TCCTTCAGGA GGGGCAGATC
TTCCGCCTTG GCGGGCGCGA GCCGGTCAGC GTGCGCACCC GCGTCATCGC CGCCACCCAT
GTCGATCTCC ACCGCGCGAT CGAGGACGGG CGGTTCCGCG AGGATCTGTT CTACCGGCTC
AACGTCCTGC AGATCGAGAT GCCACCGCTG CGCGCCAGGG ACGGCGATAT CGAGCTCCTC
GCCATGGTCG TGCTGCGCAG CGCCGTCCGC GAACTCGGCC TCGCGATCGA CGGGTTCTCG
CCCGAGGCGC TGGCGGCGCT GCGCCGGCAC GGCTGGCCGG GCAATGTGCG CGAACTGGTC
TCGACCGTTC GGCGCGCCGC GGTGATGGCC AGCGGACGGC TGATCGAGGC GGCCGACCTC
GCCCTGCCCG CGCCACGAGA GACGGCACGG CAACGGGTCG CCACCGGCCC GCATGGCGCA
ATCGACCGCG AGGCCGTGCT CGCGGCCCTG GCACGCTGCG GCCAGAACCG CGCCAGGGCC
GCGCGGGAGC TCGGGATTGC CCGCGTCACG CTTTACCGCG TGCTGCAGCG CGCGGCGACG
ACCGACCCAA ACAGGGAGAC CATTGATGAG GACTGA
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| Protein sequence | MRHTAYEGFA ARPAESVFGN GAQAHTGGAG GRAAADRVMV GQSPAMLRTF ELIRRFAPVD
APVLITGETG TGKELAARAI HDRSNACDGR FVAINCAALP ASLIASELFG YEKGAFTGAA
ARRVGLIEMA DGGSLFLDEI GDLPLELQGH LLRFLQEGQI FRLGGREPVS VRTRVIAATH
VDLHRAIEDG RFREDLFYRL NVLQIEMPPL RARDGDIELL AMVVLRSAVR ELGLAIDGFS
PEALAALRRH GWPGNVRELV STVRRAAVMA SGRLIEAADL ALPAPRETAR QRVATGPHGA
IDREAVLAAL ARCGQNRARA ARELGIARVT LYRVLQRAAT TDPNRETIDE D
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