| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2540 |
|---|
| Symbol | |
|---|
| ID | 5161740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 2791600 |
|---|
| End bp | 2792541 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640554465 |
|---|
| Product | ornithine carbamoyltransferase |
|---|
| Protein accession | YP_001235650 |
|---|
| Protein GI | 148261523 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG CCATCGATAC CGGCCGCCCC CCCGCGGCGC CGCGCCATTT CCTCGATCTG
TCGCTGCTCG ACACGCCGAC GCTGCGCCAC ATGCTGGACA CGGCGACGCG CTTCAAGCGC
GCCGGCCGCG CCCTCGGCCA TCCGCTCGCG GGGCGGGCGC TGGCGCTGAT CTTCGAGAAG
CCCTCCACCC GCACCCGCGT CAGCTTCGAG ATCGGCATGC GCCGGCTCGG CGGCGAGGTG
ATCATGCTTT CCTCGCGTGA AATGCAGATC GGCCGCGGCG AGACGGTGGC GGACACCGCC
CGCGTGCTCT CCCGCTATGT CGACGGAATC ATGCTGCGCA CCGACCGTGA GGAAAAGCTG
CGCGAACTCG CAGCACACGC CACCGTGCCG GTGATCAATG GACTCACCGA GCGCTCCCAC
CCCTGCCAGG TGATGGCGGA TGTGATGACC TTCGAGGAAC AGCGCGGCCC GATCGCCGGC
CAGCGCATCG CCTGGATCGG CGACGGCAAC AACATGGCCA AGAGCTGGAT CGAGGCTTCG
GCCCGGTTCG GCTTCCAGCT CCGCCTCGCG TGTCCGGAAG AGCTGCTACC CGACGCCGAG
GCACTCGCCT GGGCGCGCGC GCAGGGCGCC GACATCCAGC TCACCACCAG CCCGGCCGAG
GCCGTTGAAG GCGCGCGCTG CGTCACCACC GACACCTGGG TCAGCATGAG TGACGAGGAC
GTCGAGAGCC GGCACAACAT TCTCGCCCCA TACCGGGTGG ACGAGGCGTT GATGGCACGA
GCGGCGCCGG ATGCGATCTT CATGCACTGC CTGCCGGCCC ATCGCGGCGA GGAGGTCAGC
GCCGGCGTCA TCGACGGTCC GCAGTCGGTC GTGTTCGACG AGGCGGAAAA CCGACTCTTT
GCCCAGCAAG GTATCCTGGC CTGGGCACTC GGCGCGGCGT GA
|
|---|
| Protein sequence | MSAAIDTGRP PAAPRHFLDL SLLDTPTLRH MLDTATRFKR AGRALGHPLA GRALALIFEK
PSTRTRVSFE IGMRRLGGEV IMLSSREMQI GRGETVADTA RVLSRYVDGI MLRTDREEKL
RELAAHATVP VINGLTERSH PCQVMADVMT FEEQRGPIAG QRIAWIGDGN NMAKSWIEAS
ARFGFQLRLA CPEELLPDAE ALAWARAQGA DIQLTTSPAE AVEGARCVTT DTWVSMSDED
VESRHNILAP YRVDEALMAR AAPDAIFMHC LPAHRGEEVS AGVIDGPQSV VFDEAENRLF
AQQGILAWAL GAA
|
|---|
| |