Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_2498 |
Symbol | |
ID | 5161568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 2751231 |
End bp | 2752064 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640554423 |
Product | diaminopimelate epimerase |
Protein accession | YP_001235608 |
Protein GI | 148261481 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0760107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCGG CCCGACCCTT TCTGAAAATG CACGGCGCCG GGAACGATTT CGTCGTTCTC GATGCCCGCG CGCACCCGCT TGACCTCGCC CCCGCCGCCG CCGCCCGCAT CGCCGACCGT CACCGCGGCG TCGGCTGCGA CCAGATCATC CTGATCGAGC GGGACGACGG CGCCGCCGCC TTCATGCGCA TCCTCAACGC CGATGGCTCG GAATCCGGCG CCTGCGGCAA CGCCACGCGC TGCGTCGCCG CCCTGCTCGC CGGCGAAACC GGCGCCCGCC GCCTCACCAT CCGCACCAAT GCCGGCCTGC TGCCCGCCGA AATCAAGGGC CCCACCCTGG TCGAGGTCGA CATGGGCGCG CCGAAACTCG GCTGGGAAGA CATTCCCCTG GCCGAACCGG CGGACACGCT CTCGCTCCGC CTCGCCCTCG GCCCGGTGCA GAACCCCGCC GCCTGCTCGA TGGGCAACCC CCACGCCACC TTCTTCGTCG ACGACCTGAC CCACCTGCAG ATCGAGACGA TCGGCCCGAA GCTCGAACAC GCCCGCCTCT TCCCCGAGCG CGCCAATATC GGCTTCGCCC GGATCGACGC GCCGGACCGC ATCCGCCTGC GCGTCTGGGA ACGCGGCGCC GGCCTCACCC TCGCCTGCGG TTCCGGCGCG TGCGCCGCCC TGGTCAACGC CCATCGCCGC GGCCTCGCCG CCCGCCGCGC CGAGATCGAG ATGGACGGCG GCACCCTCAC CCTCACCTGG CGCGACGACG GCCACGTGCT GATGGAAGGC CCCGTCGCCC TGGTCTTCGA GGGCGAGCTG GACGCGGCCA TGCTCGCGCC ATGA
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Protein sequence | MAAARPFLKM HGAGNDFVVL DARAHPLDLA PAAAARIADR HRGVGCDQII LIERDDGAAA FMRILNADGS ESGACGNATR CVAALLAGET GARRLTIRTN AGLLPAEIKG PTLVEVDMGA PKLGWEDIPL AEPADTLSLR LALGPVQNPA ACSMGNPHAT FFVDDLTHLQ IETIGPKLEH ARLFPERANI GFARIDAPDR IRLRVWERGA GLTLACGSGA CAALVNAHRR GLAARRAEIE MDGGTLTLTW RDDGHVLMEG PVALVFEGEL DAAMLAP
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