| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2460 |
|---|
| Symbol | |
|---|
| ID | 5160630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 2714205 |
|---|
| End bp | 2715884 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640554385 |
|---|
| Product | putative ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001235571 |
|---|
| Protein GI | 148261444 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.561949 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCT ACCAGTACGT CTACGTGATG AAAGACCTCA CCAAGGCCTT CCCCGGCGGC
CGCGAGGTCT TCAAGGGCAT CACCCTCTCC TTCCTCCCCG GCGTCAAGAT CGGCGTCCTC
GGCGTCAACG GCGCCGGCAA ATCCACCCTG CTCAAAATCA TGGCCGGCAT CGAGAAGGAA
TTCGGCGGCG AGGCCTGGGC CGCCGAGGGC GTGCGCGTCG GCTACCTCCC GCAGGAACCG
CATCTCGACC CGACGCTGAC CGTCGGCGAG AACGTCGCCC TCGCCTTCGC CGACATGCGC
GCCGCCCTCG CCCGCTTCAA CGAGATCTCC GAAGCCTTCA TGGAGCCGAT GGACGACGAG
AAGATGAACG CCCTTCTCGC CGAGCAGGCC ACCCTCCAGG AGAAGATCGA CGCCGGCGAC
GGCTGGGAGC TCGACCGCCA GATCGACATC GCGCTCGACG CCCTCCGCTG CCCCCCGGCC
GACAGCCCCG TCACCAACCT CTCCGGCGGC GAGCGCCGCC GCGTCGCCCT CTGCCGCCTC
CTCCTCGAGA AGCCCGACCT CCTGCTCCTC GACGAACCGA CCAACCATCT CGACGCCGAG
TCCGTCGCCT GGCTCGAAAA GACCCTCCGC GCCTACGCCG GCACCGTCAT CCTCGTCACC
CACGACCGCT ACTTCCTCGA GAACGTCACC AACTGGATCC TCGAACTCGA ACGCGGCCGC
GGCTACCCGT TCGAGGGCAA CTACACCTCC TGGCTGGAGC AAAAGCAGAA GCGCCTCGCC
CAGGAGGAAA AGGAGGAATC CGCCCGCCAG CGCGCCCTCA AGGAAGAGCG CGAATGGATC
GGCGCCTCCC CCAAGGCCCG CCAGGCGAAA AACCAGGCCC GCATCAGCCG CTACGAGGAA
ATGCTCGCCA AATCGACCGA GCAGGTCTCC GGCGTCGCCG AAATCGTCAT CCCCCCCGGC
CCGCGCCTCG GCGGCACCGT CATCGAGGCC CAGGACCTCC GCAAGGGCTT CGGCGACAAC
CTCCTGATCG ACGGCCTCTC CTTCAAGCTC CCCCCCGGCG GCATCGTCGG CGTCATCGGC
CCCAACGGCG CCGGCAAGTC CACCCTCTTC AAGATGATCA CCGGCGTCGA AAAACCCGAC
GCCGGCACCT TCACCGTCGG CGACACCGTG AAACTCGGCT ATGTCGACCA GTCGCGCGAC
AGCCTCGACG ACAACAAGAC CGTCTGGGAG GAAATCTCCG GCGGCACCGA CGTCATCCAC
CTCGGCAAGC GCACCGTCGC CTCCCGCGCC TATGTCGGCG CCTTCAACTT CAAGGGCTCC
GACCAGCAGA AGAAGGTCGG CATCCTCTCC GGCGGCGAAC GCAACCGCGT CCACCTCGCG
AAAATGCTCA AGGGCGAACA CAACGTCATC CTGTTGGACG AGCCCACCAA CGACCTCGAC
GTCGACACCC TCCGCGCCCT GGAGGAAGCC CTCGCCGAAT TCGCCGGCTG CGCCGTCATC
ATCTCGCACG ACCGCTGGTT CCTCGACCGC CTCGCCACCC ACATCCTCGC CTTCGAGGGC
GACAGCCACG TCGAATGGTT CCAGGGCAAC TTCCAGGACT ACGAGGAAGA CAAACGACGC
CGCCTCGGCG CCGACGCCAC CGAACCCCAC CGCATCAAAT ACCGCCCCCT CACCCGGTAG
|
|---|
| Protein sequence | MASYQYVYVM KDLTKAFPGG REVFKGITLS FLPGVKIGVL GVNGAGKSTL LKIMAGIEKE
FGGEAWAAEG VRVGYLPQEP HLDPTLTVGE NVALAFADMR AALARFNEIS EAFMEPMDDE
KMNALLAEQA TLQEKIDAGD GWELDRQIDI ALDALRCPPA DSPVTNLSGG ERRRVALCRL
LLEKPDLLLL DEPTNHLDAE SVAWLEKTLR AYAGTVILVT HDRYFLENVT NWILELERGR
GYPFEGNYTS WLEQKQKRLA QEEKEESARQ RALKEEREWI GASPKARQAK NQARISRYEE
MLAKSTEQVS GVAEIVIPPG PRLGGTVIEA QDLRKGFGDN LLIDGLSFKL PPGGIVGVIG
PNGAGKSTLF KMITGVEKPD AGTFTVGDTV KLGYVDQSRD SLDDNKTVWE EISGGTDVIH
LGKRTVASRA YVGAFNFKGS DQQKKVGILS GGERNRVHLA KMLKGEHNVI LLDEPTNDLD
VDTLRALEEA LAEFAGCAVI ISHDRWFLDR LATHILAFEG DSHVEWFQGN FQDYEEDKRR
RLGADATEPH RIKYRPLTR
|
|---|
| |