Gene Acry_2446 details

Gene Information

• Locus tag: Acry_2446
• Symbol: lpxD
• ID: 5161120
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 2702853
• End bp: 2703938
• Gene Length: 1086 bp
• Protein Length: 361 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 640554372
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: YP_001235558
• Protein GI: 148261431
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.1281
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGGCA CGGCGGACCC GCGGCCGGGC GACCCCCGCT TCTTCGCCCG TCGCGGCCCC 
TTCACGGTGG CGGAGCTTGC CGCCGCGACC GGGGCCGAGC CGGCCGGCGA CGCCGCGCGC 
GAGCTCACCG GCGTCGCCCC GCTGCAAACC GCCGGCCCCG CGGATGTCAG CTTTCTCGAC 
AACCGCAAAT ATCTGCCCCT CCTCGCGGCG ACGAAGGCCG GCGCGGTCAT CCTGCGCGGC 
GACATGGCGG CCACTTCCCC CGCCGGCGCC GCCACGCTGG CCACCGACGC GCCCTACGAG 
GCCTGGGCCA GGGCCTGCGC CCTGTTCCAC CCCGCGCCCG AGGCGGTACC CGGCATCCAC 
CCGAGCGCGG TGATCGCCGA CGCCGCGAAG ATCCACCCCT CGGCCGAGAT CGGCCCCTTT 
GCGGTGATCG GCGCAGGCAG CCGCATCGGC GCCGGCAGCC GCATCGGCCC GCACGCCGTC 
ATCGGCCCCG GCGTCGAGAT CGGCGCGGGA ACCAGCGTCG GCGCGGGTGC CAGCATCGGC 
TTCGCCCTGA TCGGCGACCG GGTGACGATC CACCCCGGCG TGCGCATCGG CCAGGACGGG 
TTCGGCTTCG CGACCACGAA ACAGGGGTTT CTCTCCGTCC CGCAGCTCGG CCGGGTCATC 
ATCGAGCACG ACGTCGATAT CGGCGCGAAC ACCACGATCG ACCGCGGCTC GGCGCAGGAC 
ACCGTGATCG GCGCCGGCAC GCGTATCGAT AACCTCGTGC AGATCGCCCA CAACGTGCGC 
ATCGGCCGCT GCTGCGTGAT CGTCGCGCAG GTCGGCATAT CGGGCTCGAC CACGCTGGAG 
GATTTCGTGG TCCTCGCCGG CCAGGCCGGA ATCTCCGGCC ACGTCACGCT CGGCAAGGGC 
GCGCGCATCG GCCCGCAGGC CGGCGTGATG TCGGACGTGA AGCCGGGGAT CGACATGCTC 
GGCAGCCCGG CCCAGCCGGC GAAGGACTTC ATGCGCGAGG TCGCGGCGGT GCGGCGCTTT 
GCACGGCGCG GCGGTTTGAG GCATTCTCCG GCCCAATCGG AGCCGGAGCG GGATGCGGAA 
TCCTGA 

 

Protein sequence

MSGTADPRPG DPRFFARRGP FTVAELAAAT GAEPAGDAAR ELTGVAPLQT AGPADVSFLD 
NRKYLPLLAA TKAGAVILRG DMAATSPAGA ATLATDAPYE AWARACALFH PAPEAVPGIH 
PSAVIADAAK IHPSAEIGPF AVIGAGSRIG AGSRIGPHAV IGPGVEIGAG TSVGAGASIG 
FALIGDRVTI HPGVRIGQDG FGFATTKQGF LSVPQLGRVI IEHDVDIGAN TTIDRGSAQD 
TVIGAGTRID NLVQIAHNVR IGRCCVIVAQ VGISGSTTLE DFVVLAGQAG ISGHVTLGKG 
ARIGPQAGVM SDVKPGIDML GSPAQPAKDF MREVAAVRRF ARRGGLRHSP AQSEPERDAE 
S