Gene Acry_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_2428 
Symbol 
ID5160937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp2681060 
End bp2682256 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content58% 
IMG OID640554353 
Productphage integrase family protein 
Protein accessionYP_001235540 
Protein GI148261413 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0129894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTGA CTGATACAGC GATTCGCAAT GCCAAGCCCA AGGATAAAGC ATACAAGGTA 
GCCGACTCTC AGGGACTGTA CCTTTTGGTC AATCCTGGCG GCAGTAAGCT TTGGAGGGTC
AAATACCGCA TTAACGGCAC AGAGCGTAAG CTCTCGCTGG GGGCATACCC TGAAATCACT
CTTGCCGAAG CCCGCACCGC GCGCGATGCG GCGCGCAAAC AACTCGCCCA TGCCGTCGAC
CCCAACGCGG CCAAGCGCCA AGCCAGGATT GAGGCGAGTA TTCGGGCGGG CAACACCTTT
GCCAGCGTGG CTGACGAGCT GATCGAGAAA AAGGGCCGTG AGGGGCGGAC TGCTGCGACA
CTGGAGAAAC AACGCTGGCT ACTGAAATTG CTGGGGCAGG ATTTTGGAAA GAGGCCGGTA
GCCGACATTA CGCCTCAGGA ACTGCTTCAC GAGCTGAAAA AACACGAACG GCGCGGGCGG
CTGGAAACAG CAAAGCAACT GCGAGCCTTT GCGGGGCAGG TTTTCCGCTA CGCAGCAGCA
ACCGCACGGG CCGAACGCGA CCCGGCGCAG CTCTTACAAG GCGCGCTGAT CTCCCCGACC
GTTAAGCATT TCGCCGCGAT TACCGATACT GCACAGTTTG GTGCGCTCTT GCGAGCGATA
GACGATTACC AGGGCGACCC CGCTGTAATG TACGCCTTGA AGCTCACGCC GCATGTGTTC
CAGCGTCCCG GCGAGATACG CCAGATGGAA TGGGTAGAAA TCGACTTTAA CAAGGCCGTC
TGGACGATAC CCGAGGCCAA GATGAAGATG CGCCAGCCCC ATGTCGTGCC GCTGTCAAAG
CAGGCTCTGG CGCTTCTCCG CGAAATGCGT GGGTTGTCGG GGACGGGGCG CTATGTTTTT
CCCTCGGTGC GCACCAAAGC CCGACCAATC AGCGATAACA CCGTTAATGC TGCACTGCGG
CGAATGGGCT ACTCCAAGGA CCAGATGACG GCCCACGGCT TCCGCACCTC AGCGTCATCT
CTACTCAACG AATCAGGAAA ATGGAACCCT GACGCGATTG AACGCGCCCT GGCCCACATG
GTTCCGGGCA TTATCCGGCG TATTTACAAC CAATCGGCTT ATTGGGCTGA GCGGGTTGAG
ATGGCGCAGT GGTGGAGCAA TCATTTGGAC CAGATGAAGG ATATTGAAAT TCAATAA
 
Protein sequence
MPLTDTAIRN AKPKDKAYKV ADSQGLYLLV NPGGSKLWRV KYRINGTERK LSLGAYPEIT 
LAEARTARDA ARKQLAHAVD PNAAKRQARI EASIRAGNTF ASVADELIEK KGREGRTAAT
LEKQRWLLKL LGQDFGKRPV ADITPQELLH ELKKHERRGR LETAKQLRAF AGQVFRYAAA
TARAERDPAQ LLQGALISPT VKHFAAITDT AQFGALLRAI DDYQGDPAVM YALKLTPHVF
QRPGEIRQME WVEIDFNKAV WTIPEAKMKM RQPHVVPLSK QALALLREMR GLSGTGRYVF
PSVRTKARPI SDNTVNAALR RMGYSKDQMT AHGFRTSASS LLNESGKWNP DAIERALAHM
VPGIIRRIYN QSAYWAERVE MAQWWSNHLD QMKDIEIQ