| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2353 |
|---|
| Symbol | |
|---|
| ID | 5162163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 2591485 |
|---|
| End bp | 2592441 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640554279 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001235466 |
|---|
| Protein GI | 148261339 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCGGTG CGGCTGGGTT TATCGGCTAT CACGTCGCCG AGGCTCTTCT CTCGCGTGGT
GCGCTTGTCG CCGGGGTGGA CGATCTTAAT CCGTATTACG ATGTCAGGCT GAAGCATGCG
CGGCTTGATC GGCTGGCTGC GCATGATGGC TTTCGCTTTC ACCGGGTCGA TATCGCCGAT
CATGCGGCGT TGCGCGCGGT CGGCGATGAT TGGGATGTCA TCGTTCATCT CGCGGCGCAG
GCCGGCGTGC GCTATTCGAT CGACAACCCA TTCGCTTACG CTGCGGCGAA CCTGGTGGGG
CATCTTTCTG TCCTGGAAGT GGCGCGCCAT GTGCCACGGC TAAAGCATCT CGTGTACGCG
AGTTCGTCAT CCGTATACGG AGCCGGAACA CCGTTGCCCT ATGCCGAGAC GGCGCGAGCA
GATCGGCCTC AATCGCTCTA TGCGGCGACG AAGCGAGCAG ACGAGTTGAT GAGCGCAGCA
TACGCGCATC TCTACGGAAT TCGGCAGACC GGATTGCGCT TTTTTACGGT CTACGGGCCG
TGGGGGCGAC CGGACATGGC CTATTTCGGT TTTGCCGAAG CTATCATGGC CGGGCGCCCC
ATCACCCTCT ACGAGGCCGG GACGCTAAAG CGCGATTTCA CCTACATAGA CGATATTGTC
GAAGGTGTGA TGGGTGTGAT CGAGCATGCG CCCGCAGAGG TTGGCGCGCA TCGGATCTTC
AACATCGGGA ATCATCGGGC TGAATTCGTT CGTGACCTTG TGCAGCTGCT CGAGGAGGAA
CTGGGACGAA AAGCTGTGAT CGTCGACGCA TCGCGCCCGC CGGCTGATCC TGTCGAGACA
TGCGCCGACC TTTCGGCTCT CGCCGAGTTG ACCGGATTTG CGCCGAAAAC CAATCTGAAT
CACGGGATTA AGAAATTTGT TTCCTGGTAT CGCATTTGGT GCGCGGAGAG GGGTTGA
|
|---|
| Protein sequence | MTGAAGFIGY HVAEALLSRG ALVAGVDDLN PYYDVRLKHA RLDRLAAHDG FRFHRVDIAD
HAALRAVGDD WDVIVHLAAQ AGVRYSIDNP FAYAAANLVG HLSVLEVARH VPRLKHLVYA
SSSSVYGAGT PLPYAETARA DRPQSLYAAT KRADELMSAA YAHLYGIRQT GLRFFTVYGP
WGRPDMAYFG FAEAIMAGRP ITLYEAGTLK RDFTYIDDIV EGVMGVIEHA PAEVGAHRIF
NIGNHRAEFV RDLVQLLEEE LGRKAVIVDA SRPPADPVET CADLSALAEL TGFAPKTNLN
HGIKKFVSWY RIWCAERG
|
|---|
| |