Gene Acry_2336 details

Gene Information

• Locus tag: Acry_2336
• ID: 5159671
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 2567305
• End bp: 2567925
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 640554256
• Product: RNA polymerase sigma factor
• Protein accession: YP_001235449
• Protein GI: 148261322
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCCGGA TGCCGACCGG ATGGGCCGGT CGGCGCGGCA ACCAGCGCAA GGCGGGCACC 
CGCGAGGACA TGACAGACCC GGACGGGGAC CCGGATGCGG ACCTGCTGGC AAGGATCGGC 
ATGGGCGAGG AGGCGGCGTT TCGGACGCTG ATGGCGCACA AGCTGCCGCG CGTGCACGGG 
CTCGCGCTGC GGCTGTTGCG CGATTCGGCG CTGGCCGACG ACGTGGCCCA GGAGGTGTTC 
CTGCGGGTCT GGCGGCAGGC GCGGGCTTGG CGGCCGGGGG CGGCGCGGTT TGATACCTGG 
CTGCACCGCG TCGCGCTCAA TTTGTGCCTC GACCGGTTGC GGCGGCGGCG GGAAGTGGCC 
GTCGCCGAGC CGCCGGACCA GGTGGACCCG GCGCCGGGGG CGGATTTCAT GCTCGCGCGC 
GACGCCGAGG CGCGGCGCGT GGAGCGCGCG GTTGCCGCCC TGCCGGCGCG CCAGCGCGAG 
GCGCTGGTGA TGCAGGTGTA TCAGGGATTG TCGAATATCG AGGCCGCGGC GGCGCTGGGC 
ATCAGCGTCG AGGCACTGGA AAGCCTGCTT GCCCGCGCCC GCCGCGCCCT GCGCCAACAG 
CTCGAGGATC TGCGACCATG A 

 

Protein sequence

MGRMPTGWAG RRGNQRKAGT REDMTDPDGD PDADLLARIG MGEEAAFRTL MAHKLPRVHG 
LALRLLRDSA LADDVAQEVF LRVWRQARAW RPGAARFDTW LHRVALNLCL DRLRRRREVA 
VAEPPDQVDP APGADFMLAR DAEARRVERA VAALPARQRE ALVMQVYQGL SNIEAAAALG 
ISVEALESLL ARARRALRQQ LEDLRP