| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2291 |
|---|
| Symbol | |
|---|
| ID | 5160084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 2522262 |
|---|
| End bp | 2523728 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640554211 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_001235405 |
|---|
| Protein GI | 148261278 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTTC AGCGCGGCGC GGCAAGGAGC ACGGCGTGGA ACCTGCTCAC CGTCCTTGGC
GAGCGGAGTT TCGGATTCGC CATCCTTGTC GTGCTGCTCC GCCACGTCTC GGTGCAGGAT
GTCGGAATCG TCGCGTTGGC GTCCGCGATT TCCGAACTTG CGCGCATGGT CACGGCAGGC
GGCGCGGGTG AGCAGGTTGT GGCCGCCCCC GGAGACCGGA CCGTGGAGGC GGGGGCGTTC
TGGGCGCAGA TGCTCCTTGC GCTCGTTGTC ACCGGATTAC TTTTCGCCAT TGCCGGACCG
ATTGCCCGGT ATTATCAGGC ATCGGCGCTC GGCTGGGTCA TGCGGGCGTT GTCGCTCAAC
ATCCTTCTTG GCGCGTTCCT CATCGTGCCG GCGGCAAGGC TCGCCCAGGC GTTCCGGTTT
CGCGCGCTCA GCCTGATGTC GCTGGGCAGC ACGATGCTGG GCGGCGCGGT GGCGCTGGAA
CTCGTCTTCC ATGGCTACGG GCTGGCGGCC CTTGTCGTGC AGAGGATGGT CGGGATCGGC
TTCTATTCGG TCGCGGCATC GATCGCCGCC CGTTGGCATC CGCCTCGGCC GCCGCGATGG
GACGCTCTCG CCGCGGCGCT GCGCTTCAAC CTGCCGATGA TGGGGGCAGC GTTCGTCGAT
TATCTCGCCC ATACCGGCTA TGTCGTGCTG GTCGGCATGC GCGTGCCGGT GTTTGCCGTG
GGGCAGTTCC GCATTGCCCA GCGCCTCGCC GAAGTGCTGC AGGAACTGGC GATCCTGCCG
GCGAGCAAGG TTTTTCTCCC CGTGTTCGTG GCCGTGCGCG ACGACCAGGA ACGGCGGTAT
GCCGTTGCCT CGGCGCTGAT GGATACGCTG GCGATCCTCT CGCTGGCCGC CGCCGCCGTC
AGCGGTGCCG TCGCACACCC CCTTGTGGTG CTGATGTTCG GCGCGCGCTG GGCCAGCGCG
GCGCCGGTGT TCGCGGCGCT CAGCCTGATC GTGCCGGCCT CGACGATCTA CGCCTTCGTC
AAGCCGATGC TCACCGCCCT GCGCCGGCCG GGGCTGGTGT CGATCTTTGC GGCGTTGAAT
GCCGGCACCA TCGGACTCGC CGCCTGGTTC GCCGCACCCT ACGGGCTCGT GCCGCTCGCC
TGGGCGCTGT CCGCCCGCGG CCTGGTCGTC GCGCTGCTGC TGCTGCCGGC GCTGTCGATC
GGGATCGGCC AGTCGGGCTG GCCGCTGCTG CGGCTGATGG GCGCGCCGAT TACCGCCCTC
GTCGCCGCCC GCCTCGCGAC CGCCGCGTTC CTGCATGCGG TGGCGCCCGG CATCGGGCTG
CTGTCGCAAC TCGTACTGGG CGCGAGCGTG GCGGGCGCGG TGTTCCTGCT GGTGCTCATG
GCGCTCGCGC CCTGGCGGCT GATCGGGATG GCCCGCCGCC TGGCCTCGGC CTTCCGTCGC
AGTCCGGTGC TGACCATCGC CGGCTGA
|
|---|
| Protein sequence | MSLQRGAARS TAWNLLTVLG ERSFGFAILV VLLRHVSVQD VGIVALASAI SELARMVTAG
GAGEQVVAAP GDRTVEAGAF WAQMLLALVV TGLLFAIAGP IARYYQASAL GWVMRALSLN
ILLGAFLIVP AARLAQAFRF RALSLMSLGS TMLGGAVALE LVFHGYGLAA LVVQRMVGIG
FYSVAASIAA RWHPPRPPRW DALAAALRFN LPMMGAAFVD YLAHTGYVVL VGMRVPVFAV
GQFRIAQRLA EVLQELAILP ASKVFLPVFV AVRDDQERRY AVASALMDTL AILSLAAAAV
SGAVAHPLVV LMFGARWASA APVFAALSLI VPASTIYAFV KPMLTALRRP GLVSIFAALN
AGTIGLAAWF AAPYGLVPLA WALSARGLVV ALLLLPALSI GIGQSGWPLL RLMGAPITAL
VAARLATAAF LHAVAPGIGL LSQLVLGASV AGAVFLLVLM ALAPWRLIGM ARRLASAFRR
SPVLTIAG
|
|---|
| |