| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2289 |
|---|
| Symbol | |
|---|
| ID | 5159788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 2519040 |
|---|
| End bp | 2521313 |
|---|
| Gene Length | 2274 bp |
|---|
| Protein Length | 757 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640554208 |
|---|
| Product | malic enzyme |
|---|
| Protein accession | YP_001235403 |
|---|
| Protein GI | 148261276 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.999733 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAA CGCTTCGCAA GGCCGCACTC GATTACCACC GCCATCCGCG GCCGGGCAAA
CTCGCGATCA CGCCGACCAA GCGCATGGAA ACCTCGCGCG ACCTGGCGCT GGCCTATTCT
CCTGGCGTGG CGGCGGCCTG CCTCGCCATC AAGGACGATC CCGATACCGC TTATGACTAC
ACGACGCGCG GCAATCTCGT CGCGGTGATC ACCAACGGCA CGGCGGTGCT CGGCCTCGGC
AATATCGGCG CGCTCGCCTC CAAGCCGGTG ATGGAGGGCA AGGCCGTCCT GTTCAAGAAA
TTCGCCGGGA TCGACACGTT CGACATCGAG GTCGACCAGC CGGACCCGGA CCGGTTCATC
GAGGTGGTGG CGGCGCTGGA GCCGAGCTTC GGCGGCATCA ATCTCGAGGA CATCAAGGCG
CCGGAATGTT TCCGCATCGA GCAGACGCTG CGCGAGCGGA TGAACATCCC CGTGTTCCAC
GACGACCAGC ACGGCACCGC CATCATCGTC GGCGCCGCCG TGCAGAACGC GATGATCGTG
CAGGGCAAGA CGATCGACGA TGTCAGGATC GTCACCTCCG GCGCGGGGGC GGCGGCGATT
TCCTGCGTGC GCATCCTGAT CGCGCTCGGT GCCAACCCCG AGAACATCGT GATGACCGAT
ATCGAGGGGG TGATCTACAA GGGCCGGCCG AACCTGAACG AGACGCTGGA GCCCTTCGCC
CGCGACACTG CGGCGCGGAC CCTGCCGGAA GTGCTGGACG GGGCGGACAT CTTCCTCGGC
CTGTCCGCCC CCGGCGTGCT GAAGCCGGAA TGGCTGGACA AGTTCGCCGC CAACCCGCTG
ATCCTCGCGC TGGCCAACCC GGAGCCGGAA ATCCGCCCCG AGCTGGTGGC GGAACACCGG
CCGGATGCGA TCGTCTGCAC CGGGCGGTCG GATTTTCCGA ACCAGGTCAA CAACGTGCTG
TGCTTTCCCT TCATCTTCCG CGGCGCGCTG GATGTGGGGG CGACCGCCAT CACCGAAGGG
ATGAAGCTCG CCGCCGTCAC CGCCATCGCG GAGCTGACGC GGATCGAGGC CTCCGAGACG
GTGGCGGCGG CCTATGGCGG CGTCGCCCCG GTATTCGGGC GGGACTACAT CATTCCGAAG
CCGTTCGATC CGCGGTTGAT CCTGCACATC GCCCCTGCCG TGGCGCGGGC GGCGATGGAT
GAAGGAGTGG CGCGCCGGCC GATCGCGGAT TTCGACGTCT ACCAGCACGA TCTCGAACGC
CTCGTGTTCC GCTCGGGCCT GCTGCTGCGC CCGGTGATCG AGGTCGCGCG CTCGGCGAAG
GTGCGGATCG TCTATGGCGA GGGCGAGGAC GAGCGCACGC TGCGCGCCGC CCAGAGCGTG
ATCGACGACC GGATGGGCAC GCCGCTGCTG GTCGGCCGCA CCGCGGCGAT CATGCAGCGG
ATCGCCGCAC TCGGCCTGCG GATGAAGCCG GAGCAGGATT TCCGCATCGT CGATTTCGAG
CGCGAGCAGG GGCTGTTCCG CCGGCTGCTG GAGACGTACC AGCACATCGT CAACCGCCGC
GGCGTGCCGC CGGATGCGGC GCAGCGCCAG CTCTCGCGCC GGCCGACCGT GGCCGCCGGG
ATGCTGCTCG CCGCCGGCGA GGCGGATGCG GCGATCTGCG GCGGGCTCGG CGACTGGTCG
CGCCAGTTCC GCTACGCGAT GCCGATCATC CCGCGCAAGC CTGGGATCAA GCGGGTATCG
GCGATGACGG CGCTGATCCT GCAGAGCGGC AACCTCTTCT TCTGCGACAC GCACGTGAAC
GAGGACCCCT CGTCGGAGGA CATCGCCGAG ATGACCCATC TGGCGGCGGG AATGGTCTCG
CATTTCGGGA TCACGCCGAA GGTGGCGCTG CTGTCGCATT CGAATTTCGG GGCGTCGAAC
TCGGCCTCCG CGCGCAAGAT GCGCCGGGCG CTGGCGCTGA TCCACGCGCA GGATCCGGAA
CTCGAGGTCG ATGGCGAGAT GCACGCCGAC GCGGCACTGT TCGAACCGAT CCGCGCCCGC
GCGGTGTGCG ACAGCCGGCT GACCGGCTCG GCCAACCTGC TGGTGATGCC CTCGATCGAC
GCGGCGAATA TCGGCTTCAA CCTGCTCAAG GCCGCTGGCG AGGCGGTGAC GGTCGGCCCG
TTCCTGCTCG GCTTGTCGAA GCCGCTGCAT ATCGCGATCC CGAGCGTGAC CGCCCGCGGC
CTCGTGAACA TGAGCGCTGT CGCCGCGATG GAGGCCGCGC TGATGGCGGG GTAA
|
|---|
| Protein sequence | MDETLRKAAL DYHRHPRPGK LAITPTKRME TSRDLALAYS PGVAAACLAI KDDPDTAYDY
TTRGNLVAVI TNGTAVLGLG NIGALASKPV MEGKAVLFKK FAGIDTFDIE VDQPDPDRFI
EVVAALEPSF GGINLEDIKA PECFRIEQTL RERMNIPVFH DDQHGTAIIV GAAVQNAMIV
QGKTIDDVRI VTSGAGAAAI SCVRILIALG ANPENIVMTD IEGVIYKGRP NLNETLEPFA
RDTAARTLPE VLDGADIFLG LSAPGVLKPE WLDKFAANPL ILALANPEPE IRPELVAEHR
PDAIVCTGRS DFPNQVNNVL CFPFIFRGAL DVGATAITEG MKLAAVTAIA ELTRIEASET
VAAAYGGVAP VFGRDYIIPK PFDPRLILHI APAVARAAMD EGVARRPIAD FDVYQHDLER
LVFRSGLLLR PVIEVARSAK VRIVYGEGED ERTLRAAQSV IDDRMGTPLL VGRTAAIMQR
IAALGLRMKP EQDFRIVDFE REQGLFRRLL ETYQHIVNRR GVPPDAAQRQ LSRRPTVAAG
MLLAAGEADA AICGGLGDWS RQFRYAMPII PRKPGIKRVS AMTALILQSG NLFFCDTHVN
EDPSSEDIAE MTHLAAGMVS HFGITPKVAL LSHSNFGASN SASARKMRRA LALIHAQDPE
LEVDGEMHAD AALFEPIRAR AVCDSRLTGS ANLLVMPSID AANIGFNLLK AAGEAVTVGP
FLLGLSKPLH IAIPSVTARG LVNMSAVAAM EAALMAG
|
|---|
| |