| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2259 |
|---|
| Symbol | |
|---|
| ID | 5160861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 2490981 |
|---|
| End bp | 2492261 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640554178 |
|---|
| Product | 4-aminobutyrate aminotransferase |
|---|
| Protein accession | YP_001235373 |
|---|
| Protein GI | 148261246 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.418729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGA ATACCGACCT TCATGCGCGG CGCGAGGCCG CCGTGGCCCG CGGTGTGGGC
ATCAGCCACC CGATGGCCTA CACGGCCCGC GCCGAGAACG CCGAGCTGTG GGACGCGGAC
GGCAAGCGCT ATATCGACTT CGCCGGCGGG ATCGCGGTGC TCAACACGGG GCATCGCCAT
CCGAAGGTGA TCGAGGCGGT GAAGGCGCAG CTCGACCGCT TTACCCATAC CTGCTTCCAG
GTCACGCCGT ACGAGCCTTA CGTGGCGCTC GCCGAACGGC TCAACGCGAT CGCGCCGATC
GAGGGGCCGG CCAAGACCGT GTTCCTGACC ACCGGCGCCG AGGCGTTGGA AAACGCGATC
AAGATCGCCC GCGCCGCCAC CGGCCGCCCC GGCGTGATCA CCTTCGCCGG CGGGTATCAC
GGCCGCACCC TGCTGACCAT GGCGATGACC GGCAAGGTCA TTCCCTACAA GAAGCGCTTC
GCGCCGATGC CGGCCGAGAT CTACCACGCG CCCTTCCCGT ACGAGCCCTT CGGCGTCAGC
GTGGCCGACA GTATCCGCGG CATCGACATG CTGTTCCGTG CCGATATCGA GCCCGAGCGC
GTTGCCGCCA TCGTGATCGA GCCTGTCCAG GGCGAGGGCG GGTTCATCCC GGCGCCGACC
GAGCTGCTGG TGGCGCTGCG CGAGATCTGC GACCGCCACG GTATCCTGCT GATCGTCGAC
GAGGTGCAGA CCGGTTTCGG CCGCACCGGG AAGATGTTCG GCATCGAGCA TTCGGGCGTC
AAGCCGGACC TGATGACGAT CGCGAAATCC CTCGCCGGCG GCTTCCCGCT CTCCGGCGTG
ATCGGCCGCG CCGCGGTGAT GGATGCGCCG GAGCCCGGCG GCCTCGGCGG CACCTATGCC
GGCAATCCGC TCGCCTGCGC CGCCGCCCTT GCCGTGCTCG ACGTCATCCG GGATGAAAAC
CTGGTGGAGC GCGCCAATGC GATCGGCGCC ACGATGAAGA GCCGGCTGGA ACGCATCGCC
TCGCGCAACG ATGTGGCGCC GATCACCGCG ATCCGCGGTC CGGGGGCGAT GATCGCCTTC
GACATCGTCA GGCAGCGCGG CAGCTACGAG CCCGACCCCG ACACTACGAA GCAGGTCATC
GCGCGCGCCC GCGAACACGG GCTCATCGTG ATTTCCTGCG GCGTCTATGG CAACGCCATC
CGCCTGCTGG TGCCGCTGAC GGTGAGCGAC ACGGTTCTGG GCGAGGGGAT GGACGCGCTG
GAAGCCGCCC TCGCCGGCTG A
|
|---|
| Protein sequence | MSTNTDLHAR REAAVARGVG ISHPMAYTAR AENAELWDAD GKRYIDFAGG IAVLNTGHRH
PKVIEAVKAQ LDRFTHTCFQ VTPYEPYVAL AERLNAIAPI EGPAKTVFLT TGAEALENAI
KIARAATGRP GVITFAGGYH GRTLLTMAMT GKVIPYKKRF APMPAEIYHA PFPYEPFGVS
VADSIRGIDM LFRADIEPER VAAIVIEPVQ GEGGFIPAPT ELLVALREIC DRHGILLIVD
EVQTGFGRTG KMFGIEHSGV KPDLMTIAKS LAGGFPLSGV IGRAAVMDAP EPGGLGGTYA
GNPLACAAAL AVLDVIRDEN LVERANAIGA TMKSRLERIA SRNDVAPITA IRGPGAMIAF
DIVRQRGSYE PDPDTTKQVI ARAREHGLIV ISCGVYGNAI RLLVPLTVSD TVLGEGMDAL
EAALAG
|
|---|
| |