| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2246 |
|---|
| Symbol | secA |
|---|
| ID | 5161811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 2479294 |
|---|
| End bp | 2482113 |
|---|
| Gene Length | 2820 bp |
|---|
| Protein Length | 939 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640554165 |
|---|
| Product | preprotein translocase subunit SecA |
|---|
| Protein accession | YP_001235360 |
|---|
| Protein GI | 148261233 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCG GGCGGGCTGC CTTCACACCC AGACCACTCG GGACAGACAG TTTCAGACTC
GCGGATAGAC CGGAAGCTCG CTCCAACATG TTCTCAAGCA TCGCCCGCGC CATCATCGGC
ACCAGCAACG ACCGCGCGCT GAAAGCCTAT CGCCGCCGCA TCGCCGAAAT CAATGGCCAC
GAAGCCGCCC TGGCCACGCT CGATGATGCG GCCCTCCAGG GCAAGACCTC CGAATTCCGC
GACCGCCTCG CCGCCGGCGA AAGCCTCGAC CGCCTGCTGC CCGAGGCGTT CGCCGTCTGC
CGCGAAGCCG CGAAGCGCGT GCTCGGCATG CGCCATTTCG ACGTGCAGCT GATCGGCGGC
ATGGTGCTGC ACGATGGCAA GATCGCCGAG ATGAAGACCG GCGAGGGCAA GACGCTCGTC
GCCACCCTGC CGGTCTATCT CAACGCGCTC AGCGGCAAGG GCGTGCATGT CGTCACCGTC
AACGATTATC TCGCCAAACG CGACGCCGGC TGGATGGGCC AGCTCTACAA CTTCCTCGGC
CTGTCCGTAG GCGTGATCGT GCCCGGGCTG GAGGACGATG CGCGGCGCGA CGCCTACGCG
GCCGACATCA CCTACGGCAC CAACAACGAG TTCGGCTTCG ACTATCTGCG CGACAACATG
AAATACGCGC TGGCCGACAT GGTGCAGCGC GACTTCAATT ACGCGATCGT CGACGAGGTC
GACTCGATCC TGATCGACGA GGCCCGCACC CCGCTGATCA TCTCCGGCCC CTCCGACGAG
CCGACCGAAC TCTACAACCA GGTCGACGGC ATCGTGAAGC AGCTTGTCGA GGACCCCGAT
ACCTACGACA AGGACGAGAA GTTCAAGACG GTGAACCTCA CCGAGCTCGG CTCCGAGCGG
GTCGAGCAGA TGCTCTCCGA GGCCGGGCTG CTCACCGAGG GCAATCTCTA CGACGTCTTC
AACGTCTCGC TGGTGCATCA CACGAACCAG TCGCTGCGCG CGCACACGCT GTTCACCCGC
GATGTGGATT ACATCGTCAA GGACGGCCAG GTCATCATCA TCGACGAGTT CACCGGCCGC
ATGATGGAGG GCCGCCGCTA TTCCGACGGG CTGCACCAGG CGCTGGAAGC CAAGGAGCAC
GTCACGGTCG AGCGCGAGAA CCAGACCCTC GCCTCGATCA CCTTCCAGAA CTATTTCCGC
CTTTACCCCA AGCTCTCCGG CATGACCGGC ACGGCGATGA CCGAGGCCGA CGAGTTCGAC
GAGATCTACA AGCTCGCGGT GGTCGAAATC CCGACCAACG TGCCGGTCGC CCGCAAGGAC
GGCGATGACG AGGTCTACCG CTCGGCCGAC GAGAAATACG AGGCCGTCGC CGCGCTGATC
GAGGAATGCC GCCAGCGCCA GCAGCCGGTG CTGGTGGGCA CCACCTCGAT CGAGAAATCG
GAGATCATCT CGAACCTGCT CAACAGCCGG AAAATTCCCC ACGCCGTGCT GAACGCGCGG
TTTCACGAGC AGGAAGCGGC GATCGTCGCC GAAGCCGGCG CGCCGGGTGC TGTCACGATC
GCGACAAACA TGGCCGGCCG CGGCACCGAC ATCAAGCTCG GCGGCAATCT CGAGATGCGG
TTGAAGACCG AACTCGAAAG GCTGCCCGAA TCCGCCCGCC CGGCACGCGA GGCGGAGATC
CGCGCCGAGA TCGAGGCGGC GCACGACATC GTCCATGCCG CCGGCGGCCT GTTCGTGATC
GGTACCGAGC GGCACGAGAG CCGCCGGGTC GACAACCAGC TGCGCGGCCG CTCCGGCCGC
CAGGGAGACC CCGGCGCCTC GCGCTTCTTC CTCTCCCTCG AAGACGACCT GATGCGGATC
TTCGGCTCCG ACCGGATGGG CCCGATGCTG GAGAAGCTCG GTCTCAAGGA CGGCGAGGCG
ATCATCCATC CGTGGATCAA CAAGGCCCTC GAAAAGGCCC AGAAGAAGGT CGAGGCGCGG
AACTTCGACA CCCGCAAGAA CCTTCTCAAA TACGATGACG TGATGAACAA CCAGCGCAAG
GAGGTTTATG CCCAGCGCCG CGAGTTCATG CGCGCCGAAA GCGTCGCCGA TGTGATCGGC
GAAATGCGCG CCGACACGAT CGCCCAGATG GTCGAGCGGC GAATCCCCGA GAAGGCCTAT
GCCGAGCAGT GGGAAAGCGC GGAACTCGCC GAGGACGTGA AGCGCGTGTT CGGCCTGGAG
CTGCCGGTCG TCGACTGGGC CGCCGAGGAA GGCATCGACG AGAGCCATCT GCGCGAGCGC
ATCAGCGAGG CGGTCGAGGC CCACATGGCC GCCAAGGCCG CCAATTTCGG CCCGGATTTC
ATGCGCTTCC TCGAGAAATC GATCCTGCTG CAAACGCTGG ATCATCTCTG GAAGGAACAT
CTGCTCGCGC TTGACCATCT GCGTCAGGGC ATCGGCCTGC GCGCCTATGG CCAGCGCGAC
CCGCTCAACG AATACAAGGC CGAGGCCTTC GCCCTGTTCA CCGCGATGCT CGAGGACCTG
AAGGAACAGG TCTCGTCGGT GCTCGCACAT GTTGAACTCG GCTCCGACCC GGCCACGGCA
CCGGCGCCCG CCTTCGATCC GGCATCGATG TTCACCAGCC ATCCCGCCAG CGGCCCGTAT
GACGGCGTCG CCCTGGCGGA ACCGCAGCCG ACGCTCGCGC CGGAGATGGC GGTCAGCACC
TACCGGGCCG AATCGGTTGA TCCCAACCGA CCGGAGACCT GGGCGTCCAC GCCGCGCAAT
GCCGCCTGCC CATGCGGCTC GGGCAAGAAA TACAAATACT GCCACGGCAG GGTGACCTGA
|
|---|
| Protein sequence | MARGRAAFTP RPLGTDSFRL ADRPEARSNM FSSIARAIIG TSNDRALKAY RRRIAEINGH
EAALATLDDA ALQGKTSEFR DRLAAGESLD RLLPEAFAVC REAAKRVLGM RHFDVQLIGG
MVLHDGKIAE MKTGEGKTLV ATLPVYLNAL SGKGVHVVTV NDYLAKRDAG WMGQLYNFLG
LSVGVIVPGL EDDARRDAYA ADITYGTNNE FGFDYLRDNM KYALADMVQR DFNYAIVDEV
DSILIDEART PLIISGPSDE PTELYNQVDG IVKQLVEDPD TYDKDEKFKT VNLTELGSER
VEQMLSEAGL LTEGNLYDVF NVSLVHHTNQ SLRAHTLFTR DVDYIVKDGQ VIIIDEFTGR
MMEGRRYSDG LHQALEAKEH VTVERENQTL ASITFQNYFR LYPKLSGMTG TAMTEADEFD
EIYKLAVVEI PTNVPVARKD GDDEVYRSAD EKYEAVAALI EECRQRQQPV LVGTTSIEKS
EIISNLLNSR KIPHAVLNAR FHEQEAAIVA EAGAPGAVTI ATNMAGRGTD IKLGGNLEMR
LKTELERLPE SARPAREAEI RAEIEAAHDI VHAAGGLFVI GTERHESRRV DNQLRGRSGR
QGDPGASRFF LSLEDDLMRI FGSDRMGPML EKLGLKDGEA IIHPWINKAL EKAQKKVEAR
NFDTRKNLLK YDDVMNNQRK EVYAQRREFM RAESVADVIG EMRADTIAQM VERRIPEKAY
AEQWESAELA EDVKRVFGLE LPVVDWAAEE GIDESHLRER ISEAVEAHMA AKAANFGPDF
MRFLEKSILL QTLDHLWKEH LLALDHLRQG IGLRAYGQRD PLNEYKAEAF ALFTAMLEDL
KEQVSSVLAH VELGSDPATA PAPAFDPASM FTSHPASGPY DGVALAEPQP TLAPEMAVST
YRAESVDPNR PETWASTPRN AACPCGSGKK YKYCHGRVT
|
|---|
| |