Gene Acry_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_2239 
Symbol 
ID5160626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand- 
Start bp2470665 
End bp2471696 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content65% 
IMG OID640554158 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_001235353 
Protein GI148261226 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.957083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACCA GAACGATATT GCTTGCGGCC ACGTGCATCG GCGCTGCCAT GCTGACGGTC 
GCATCCGCAC AGGCGGCGAA GCAGACTGCC GCGCAGATGA TCCTGGGAAC GTCGAAGGCG 
GTGTGTGTGA ACCCGCACCC GAGCCACGCG AAGCTGTCGA GCCTCGTGGT CGGCTTCTCC 
CAGTCGCAGG GCAACCAGAA CCCGTTCCGC GCCGAAGAGA CGCGGTCGCT GCGGGAAGCC 
GCGCATCAGG TGCACGCGAA GCGCTACATC TACACCAACG CGCATTCCAA CGAGGCGAAG 
CAGGTCGCCG ATGTCGAGAG CATGATCAAC CAGGGCGCGC AGGCCCTGGT CATCGCGCCG 
CTCAACTCGA CCGGGCTGCA GCCGGCCTTC GCCCAGGCGG TCGCGAAACA TATCCCGATC 
ATCACGATCG ACCGCGAGAC GGCCGGAACC CATTGCTCCG ACTTCCTGAG CTTCGTCGGG 
TCGGATTTCT ACAACCAGGG TGTGATCGAC GGCCGCGAAC TGGCCAAGGC GACGGGCGGG 
CACGCCGTGA TCGCCGAGAT CCAGGGCGCC TACGGCAATT CGGTGGAAAC CGCGAGAACC 
AAGGGCTTCG CCGCCGCGAT ATCGAAATAT CCCGGCATGA AGGTCATCGC CGCGCAGACC 
GGCAACTGGT CGACGACCGA CGCGCAGAAG GTGGTCAGCC AGATTCTGCT CGCGCATCCC 
GATGTCAACG CGATCTACAC GCAGAGCGAC ACGATGGCCT ACGGCGCCAT CACCGCCCTG 
CGCGACGCCG GCAAGAAGCC GGGGCAGGTC AAGATCGTGA CCATCGACGG CACCAAGCAG 
GGCGTGCAGG ACATCGTCTC CGGCTGGATC TATGCCGATG ACGAGACCAA TCCGCGCTTC 
GGGCCGATCG CCATGCACGA GATCCAGAAC TGGCTCGACG GCAAGCCGGT GCCGCAGAAG 
ATCACGATCC GCGATCATCT CTACACGCCC GCCAATGCCA AGGCGGCGCT GGCCAGCGGC 
GTTCCCTACT GA
 
Protein sequence
MKTRTILLAA TCIGAAMLTV ASAQAAKQTA AQMILGTSKA VCVNPHPSHA KLSSLVVGFS 
QSQGNQNPFR AEETRSLREA AHQVHAKRYI YTNAHSNEAK QVADVESMIN QGAQALVIAP 
LNSTGLQPAF AQAVAKHIPI ITIDRETAGT HCSDFLSFVG SDFYNQGVID GRELAKATGG 
HAVIAEIQGA YGNSVETART KGFAAAISKY PGMKVIAAQT GNWSTTDAQK VVSQILLAHP 
DVNAIYTQSD TMAYGAITAL RDAGKKPGQV KIVTIDGTKQ GVQDIVSGWI YADDETNPRF 
GPIAMHEIQN WLDGKPVPQK ITIRDHLYTP ANAKAALASG VPY