| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2121 |
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| Symbol | |
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| ID | 5161410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 2348494 |
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| End bp | 2349585 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640554043 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001235239 |
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| Protein GI | 148261112 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.931195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGATC TCGCGCATAT GCGGACGGCC CTCGCGCTCG CACGGCGCGG CCTGGGCGAG
ACCGCGCCGA ATCCGACCGT CGGCTGCGTG ATCGTGCGCG GCGGGCGGGT GGTCGGGCGT
GGCCGCACGG CGCAAGGCGG GCGGCCGCAT GCCGAAACCG AAGCCCTTGC CGCGGCGGGC
GACGCGGCAA GGGGCGCCAC CGCCTATGTC ACGCTCGAAC CCTGCGCCCA TCACGGCCGG
ACGCCGCCCT GCGCCGATGC GCTGGTCGCG GCCGGCATCG CGCGCGTCGT CGTCGCCATG
ACCGACCCGG ACGAGCGGAC CAACGGCGCG GGCCTCTCCC GCCTGCGCGA GGCGGGACTC
GAGGTGGTCG AGGGAATTGG CGGTGCCGAG GCCGCGGAAA TCAATGCGGG GTTCTGCAAG
CGCATCCGTG AGGGGCGGCC GCTGGTGACG CTGAAGCTCG CGACCTCGCT CGACGGGCAG
ATCGCGACGC GCACCGGCGC CAGCCAGTGG ATCACCGGTG CGGCGGCCCG CCAGGCGGCG
CACGCGTTGC GCGGGACGCA TGACGCCGTG ATGGTCGGCG TCGGCACCGT GCTGGCCGAT
GATCCGGAAC TGACCTGCCG CCTCGAGGGC TTCCGCAGCA CGCCGGTCAT CCGCCTGATC
GTCGATTCGC ATTTGCGGAT CCCGCTCGAC GGGCGGCTGG TGCGCGGGGC CGCGGACCAC
CCCCTCTGGA TCGTGCATCG CGACGGCGCC GACCCGGCCC GGCGCGCGGC GCTGCTCGAT
CTCGGCGCCC GGCTGTTCGA GGTTCCCGCC GCCCCGGTGG GGATCGACCT TGCGGCGGCG
CTCGCGGTGG TGGGCGCGGC GGGGCTGACC CGCGTGCTGG CCGAGGGCGG CGGCACTCTT
GCGGCGGCGC TGATCCGTGC CGATCTGGTG GACCGTCTGG AGTGGTTCAC CGCCCCGGTC
GTGATCGGCG ATGACGGGAT CGGCGCGGTG GCCGGCTTCG GTGTGGAGGA GTTGGGCCGG
GCGGCGCGTT TCACGCGCAT CGACGCGTCG GTTTGCGGCG GCGACATCCG CACGCGCTAT
CGGAGGGATT GA
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| Protein sequence | MDDLAHMRTA LALARRGLGE TAPNPTVGCV IVRGGRVVGR GRTAQGGRPH AETEALAAAG
DAARGATAYV TLEPCAHHGR TPPCADALVA AGIARVVVAM TDPDERTNGA GLSRLREAGL
EVVEGIGGAE AAEINAGFCK RIREGRPLVT LKLATSLDGQ IATRTGASQW ITGAAARQAA
HALRGTHDAV MVGVGTVLAD DPELTCRLEG FRSTPVIRLI VDSHLRIPLD GRLVRGAADH
PLWIVHRDGA DPARRAALLD LGARLFEVPA APVGIDLAAA LAVVGAAGLT RVLAEGGGTL
AAALIRADLV DRLEWFTAPV VIGDDGIGAV AGFGVEELGR AARFTRIDAS VCGGDIRTRY
RRD
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