Gene Acry_2094 details

Gene Information

• Locus tag: Acry_2094
• ID: 5161864
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: -
• Start bp: 2306806
• End bp: 2308746
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640554016
• Product: Rhs element Vgr protein
• Protein accession: YP_001235212
• Protein GI: 148261085
• COG category: [S] Function unknown
• COG ID: [COG3501] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR01646] Rhs element Vgr protein; [TIGR03361] type VI secretion system Vgr family protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.730907
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACTA ATATCGATCT GCTTGACCTC CAGACATCGC TTGGTAGCGG CGTCCTGACG 
CTGGTCGGGG TCAATGGCCA GGCGGCGCTC AGCCAGTGCT TCCGGTATAC GCTGTCGGTG 
CGCGCGGGTG CCGGCGGGCT CGATCCGAAC GATCTTCTAT ACACGTCGGT CACCGTCGCG 
ATCGGGTCCG ACGGGACGAA CCAGACCTAC ATCAATGGCC TCGTCTCGTC CGTGGTCCAG 
AAGCCCGGCA ACGCGGCCGG TACCGCGATC GCCGCCGGCC TCGAACTCTG GGATCATGAA 
CTGACGGTCG TTCCCGCCCT CTGGTTCCTC GGGCAGACAC TCGATTGCCG GATATTCCAG 
AACAAGACCG CCGTTGCCAT CGTCAAGGAA GTTCTGGACG AATTCGAGAT TACTTCATAC 
GAGCTGCCGA GTGGCGGGAC GAGCTATGAC TATACAGTCA TGTTCAATGA GACCTATCTG 
GACTTCATAA ATCGCATCCT CGCGCGCGAT GGGCTTTTCT ATTATTTCGT CCACGAAAAG 
TCCGGACACA AGTTCGTCGT CGCCAGCAGC TCGCAATCTC TCCCCAAGTT GGGAGCCGTC 
AAATTCGCCG GGCAGACCGC GACCGAAGTC GGGGTTCATA CGCTCAGCCG CGCCGACAGC 
ACGACCATCG GCAAGTTCAT CGGGAACGAC TACAACTATG AAACGGCATC CACCGGCCTC 
GTCTCCGATG CGGATACCGT GCTCAAGGCG AAGGGGGCGG CAACCCGCAA ATTCTATCGC 
TACCCGTCGG AAAATCCCGT CAAGGAGGCG ATCGGACAGC AGGTGCGCCA TCAGAACGAG 
GCGGCCGAGG TTCGTGCCGG GTTGTTCGCC GGTGGCGGCA ACACCCCGTC GATGCTCGCT 
CCCGGCAACG CCGTCACCAT CACCGGCGAT CCCTTCGGCA TCGGCGATTA CGTCATTGCG 
GCGGCCGCGC TCAGCGTGAC CGATCACGCC GGCATCGGCG GAGGGACGGC CACCGTCGAT 
GTCGCATTCA CCCTGTTCGA CGCATCCGTT CCCTGGCGGC CGGAACTCCT GCCGAAGCCG 
CAGATCGCCG GCTTGCAGTC CGCCCTCGTC GTCGGGCCCT CGGGCGATGA AATTTACACG 
AACAAGTACG GCCGGGTGAA GGTTCAGTTC AACTGGGACA CGCGCGGCAA GAAGGACGAG 
AACTCGAGTT GCTGGGTTCG CGTGATCCAG CCCTGGGCCG GCGCCGGCTG GGGGTTCCAG 
TTCCTTCCGC GCATCGGCCA GGAGGTCGCC ATCAGCTTCC TCGAGAGCGA CATCGACCGG 
CCGGTCGTGA TCGGTTCCTT CTACAACTCC GGCCAGGTCA GCCTGTTCAA TCTCCCCGCC 
GAGCAGAACA AGGCGGGATT CCGCTCCCGC TCAACCAAGA GTGGCGGGAC GTCGAACTAC 
AGCGAATTCA GTATCGACGA TACCAAGGGT TCGGAGGTTG TCCTGCTGCA TGCGGAGCGG 
GATTATACGG TCGAGGTCGA GCATGATGAA ACCCGCACGA TCGGCAACAA CCGCACGGTG 
ACCGTCAAGA AGGACGAGGC GATCACCGTG GACGGCAACC AGACCGAGAC GGTGAAAGGA 
AATCGTACCT TCGAGGTCAA GCAGGACCAT TCCGAGACGG TCGATGGCAA CCAGTCCGTC 
ACGGTCAAGG GCAAGCAGAG CGTGTCGGTG CAGGGGCAGC AATCCGTATC CGTGACCGGG 
GCCGTCACCT ATGAGTCGAT GGAGTCGATC ACGCTGAAAG TGGGCGGAAA CAGCATCAAG 
ATCGACATGA CGGGCATCAC GCTCTCCGGC ACCCTCATCA AGATCAATGC CCAGGCCGAG 
CTGTCGACGA GCGGCGCGAT TGCGCAGCAT TCCGGCTCGG GGATGCTGAA ACTCCAGGGC 
GGGATCATCA TGGTGAACTG A 

 

Protein sequence

MTTNIDLLDL QTSLGSGVLT LVGVNGQAAL SQCFRYTLSV RAGAGGLDPN DLLYTSVTVA 
IGSDGTNQTY INGLVSSVVQ KPGNAAGTAI AAGLELWDHE LTVVPALWFL GQTLDCRIFQ 
NKTAVAIVKE VLDEFEITSY ELPSGGTSYD YTVMFNETYL DFINRILARD GLFYYFVHEK 
SGHKFVVASS SQSLPKLGAV KFAGQTATEV GVHTLSRADS TTIGKFIGND YNYETASTGL 
VSDADTVLKA KGAATRKFYR YPSENPVKEA IGQQVRHQNE AAEVRAGLFA GGGNTPSMLA 
PGNAVTITGD PFGIGDYVIA AAALSVTDHA GIGGGTATVD VAFTLFDASV PWRPELLPKP 
QIAGLQSALV VGPSGDEIYT NKYGRVKVQF NWDTRGKKDE NSSCWVRVIQ PWAGAGWGFQ 
FLPRIGQEVA ISFLESDIDR PVVIGSFYNS GQVSLFNLPA EQNKAGFRSR STKSGGTSNY 
SEFSIDDTKG SEVVLLHAER DYTVEVEHDE TRTIGNNRTV TVKKDEAITV DGNQTETVKG 
NRTFEVKQDH SETVDGNQSV TVKGKQSVSV QGQQSVSVTG AVTYESMESI TLKVGGNSIK 
IDMTGITLSG TLIKINAQAE LSTSGAIAQH SGSGMLKLQG GIIMVN