| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2048 |
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| Symbol | holA |
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| ID | 5162411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 2250737 |
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| End bp | 2251741 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640553971 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_001235167 |
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| Protein GI | 148261040 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.296688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGATCG ACGCCCGCCA CGTCGAGACA TTCCTCGCCG ATCCGGGCCG CGCGCGGTTC
GTTCTTGTCT ACGGACCCGA CACCTCGCTG GTTGCCGAAC GGGCGCGCCG GCTGGCGAAG
CTGGTCGCGG GATCGCTCGA CGATCCGTTC CGGCTCACCG AACTCGATGC CGACACCGCC
GAGCGCCTGC CCGAGGAAGC CGGGGCGCAG GCCTTCGGCG GCGGCCGCCG GGTGGTGCTG
CTGCGCGATG CCGGCGACCG GCAGGTGGCA CCCGTCGAGG CCGCGCTGGA GGGGAAGGGC
GATGCCCTCA TCGTCGCCAT CGGCGGTGAT CTGCCGGGGC GGTCGAAACT CCGCGCCCTG
GCGGAAAAGC ACGCGGAGGC GGCGGCCATC GCCTGCTACC TGCCGGATGG CGCGGCCCGC
GGCCCGGCGC TCGAGGCGGC GCTGCGGGCG GCCGGCGTGG GCATCGGCCG CGAGGCGCTC
GCCCTCGCCG CGAGCCGGCT CGGCGGCGAG ACGGGGGCGC TGCGCGACGC GGCGGAACGG
CTCGCCCTCT ATGCCGGGCC GAACGGCGCG GTGGATATCG AGGCGGTCGA GGCGGTGCTC
GATGATCAGG GCTCGGCCTC GATGCAGGAT GCGATCGATG CTGCCCTGGC CGGCGACGTG
AAGGCGGCGG ACCACGCGAT CGGGCTGGCG CTGGAGGAAG GCGCCGCGCC GGTCGCGGTG
ATCCGCGTGC TGCTCGGCGA ACTCGCCGGG TTGCGGCTGA TGGCCGACGC GGTCGCCGGC
GGCGCGAGCC CGCGCGATGC CGTTGCGGCG CGCCGGCCGC CGGTGTTCTT CAAGCGCCAG
CCGGTCGTGA TGAAGGCGGT GGCGCGCTGG CGGGAGCCGG CGATCATGGC GGCGATCGAA
CGGGGCCTGC GCGCCGAGGC GGACTGCAAG CGCACCGGGG CGGTGCCCGA GGCGATCGTG
CGGCAGATGC TGCTGGGGCT CGCGCAGCGC GCCGCCCGCG CCTGA
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| Protein sequence | MKIDARHVET FLADPGRARF VLVYGPDTSL VAERARRLAK LVAGSLDDPF RLTELDADTA
ERLPEEAGAQ AFGGGRRVVL LRDAGDRQVA PVEAALEGKG DALIVAIGGD LPGRSKLRAL
AEKHAEAAAI ACYLPDGAAR GPALEAALRA AGVGIGREAL ALAASRLGGE TGALRDAAER
LALYAGPNGA VDIEAVEAVL DDQGSASMQD AIDAALAGDV KAADHAIGLA LEEGAAPVAV
IRVLLGELAG LRLMADAVAG GASPRDAVAA RRPPVFFKRQ PVVMKAVARW REPAIMAAIE
RGLRAEADCK RTGAVPEAIV RQMLLGLAQR AARA
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