Gene Acry_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1973 
Symbol 
ID5161139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand- 
Start bp2164103 
End bp2165212 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content65% 
IMG OID640553894 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001235093 
Protein GI148260966 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4213] ABC-type xylose transport system, periplasmic component 
TIGRFAM ID[TIGR02634] D-xylose ABC transporter, substrate-binding protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG CGTTCCCGAC GATTATTGCC GCGTCCGCGC TGGCGGTTGG CGCCTTCGGC 
CTGACGGCCG CGCACGCCCA GTCGGTCACC CAGCCTTCCG TGCACCAGAT CAGCAGCAAG 
AAGACGACGA TCGCCTTCCT GCTGCCCGAG AACTCCTCGC CGCGCTATGA GCAGGTCGAC 
CGTCCCTGGT TCATCAAGAT GGCGCATGCG GCCGATCCGA ACGCCAAGCT GATCGTCAGC 
AACGCCAATT CGAGCCCCGA CACCCAGCTC AACCAGGCCG AATCCGCGAT CTCGAACGGC 
GCGGACGTTC TCGTCGTCGA TCCGGTCGAC GGCAAGGCCG GTGCCGCGAT CGTCAACTAC 
GCCGCGCGCA ACCACGTCAA GGTCATTTCC TACGACCGTC TGATCCAGGA TTCGAAGCCC 
GATTACTACG TCTCGTTCGA CAACACGAAG GTCGGCGAGC TGCAGGGCGA GTATATCGCC 
AAGCACACCA AGCCCGGCGG CAGCGTGATG ATGATCAACG GCGCGCCGAC CGATCCGAAC 
GCGTTCGACT TCCGCAAGGG CGCGATGAAC GTGCTCGGCC CGCTCTTCAA ATCCGGCAAG 
CTGCACCTCG CCTACTCGGT GATGACGCCG GACTGGAGCC CGCAGAACGC GTTCGAGGAA 
AGCCAGCAGG CGCTCACCCG GCTGCACAAC AAGGTCAACG CCGTCCTCGC CGCGAATGAC 
GGCACCGCCT CCGGCGTGAT CCGCGCGCTC CAGGCGGTCG GCCTCGCCGG CAAGGTGCCG 
GTGACCGGCC AGGATGCGAC CAATGGCGGC CTGACCTTCA TCCTCGAAGG CCTGCAGTCG 
ATGACCGTGT TCAAATACGT CCCCGAGGAA GCCGCCGCGG CGGCGGAACT CGCGGTGGCG 
GTGGCGACCG ACACGAAGCC GCCGGCCGGC CTGCTGAACG GCAAGACCAA CAACAAGATG 
ATCGACGTCC CGTCGGTCCT GCTGAAGCCG CTCGTGGTCA CCAAGGCGAA TATCGCCGGC 
TCGGTGATCA AGTCGGGCTA TACCACCTGG AAGGCGATCT GTGTGGGCCC CGCGGCCCAG 
GGCAAGATCT GCAAGGCCCA CGGCGCCTGA
 
Protein sequence
MKIAFPTIIA ASALAVGAFG LTAAHAQSVT QPSVHQISSK KTTIAFLLPE NSSPRYEQVD 
RPWFIKMAHA ADPNAKLIVS NANSSPDTQL NQAESAISNG ADVLVVDPVD GKAGAAIVNY 
AARNHVKVIS YDRLIQDSKP DYYVSFDNTK VGELQGEYIA KHTKPGGSVM MINGAPTDPN 
AFDFRKGAMN VLGPLFKSGK LHLAYSVMTP DWSPQNAFEE SQQALTRLHN KVNAVLAAND 
GTASGVIRAL QAVGLAGKVP VTGQDATNGG LTFILEGLQS MTVFKYVPEE AAAAAELAVA 
VATDTKPPAG LLNGKTNNKM IDVPSVLLKP LVVTKANIAG SVIKSGYTTW KAICVGPAAQ 
GKICKAHGA