| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1960 |
|---|
| Symbol | |
|---|
| ID | 5160852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 2150176 |
|---|
| End bp | 2151018 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640553881 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001235080 |
|---|
| Protein GI | 148260953 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01459] HAD-superfamily class IIA hydrolase, TIGR01459
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG ATACGATGAG CGTCGAAACC CTCGCCCATG ATCACGACGG CTTCATCGTC
GATCTCTGGG GCGTGGTGCA TGACGGCGTG CGCCCCTATC CCGGCGTTCC CGCCTGCCTG
CGCCACCTGC GCGAGGCCGG CAAGCGCGTC GTCTTCCTCT CCAACGCGCC CCGCCGCACC
GCGCCGGTCG CCGCCGCCCT GGCCGCGATG GACATCGGCC CCGAGCTATA CGACGGCATC
ATGACCAGCG GCGAAGCCGT CCGCGCTGCG CTGGTCTCAC GCACCGAGCC CGATTTCGCG
GCCCTGGGCG ACCGTCTGTT CCATCTCGGC CCGCCGCGTG ACCGCAACCT GTTCGATGAT
CTCGGCCTCG CCGAGGCCGA CCGCCCCGGC GCCGCCGATT TCCTGCTCAA CACCGGCCCG
GACGATCTCG CGCCGCCCGA CGATCCCGCC GCCTTCGATC CGTTGCTGCG TGAGGCCCTC
GGGGCCGGGT TGCCGATGGT CTGCGCCAAC CCGGACCTGG AGGTGATTCG CGACGGGCGC
CGCATCATCT GTGCCGGCAC GCTCGCCCAG CGCTACGCCG CCTGGGGCGG GCGGGTGATC
TGGCGGGGCA AGCCCGATCC CGCCGTCTAT CGCCCGACCC TCGACCTGCT CGGCACCGAA
CCTGGCCGGA CCATCGCGTT CGGAGATTCG CTGCGCACCG ACATCGCCGG CGCGAAGGCG
GCCGGCATCG CCTCGGTGCT CGTGCTGTCC GGCATCCACG TCGCCACGCC GGCCGAGGCG
CGGGCCGATT GCGCGGCCGC CGGGCTCGAT CCGCGCGCCA TCATCGGCGG GTTCCGCTGG
TAA
|
|---|
| Protein sequence | MTADTMSVET LAHDHDGFIV DLWGVVHDGV RPYPGVPACL RHLREAGKRV VFLSNAPRRT
APVAAALAAM DIGPELYDGI MTSGEAVRAA LVSRTEPDFA ALGDRLFHLG PPRDRNLFDD
LGLAEADRPG AADFLLNTGP DDLAPPDDPA AFDPLLREAL GAGLPMVCAN PDLEVIRDGR
RIICAGTLAQ RYAAWGGRVI WRGKPDPAVY RPTLDLLGTE PGRTIAFGDS LRTDIAGAKA
AGIASVLVLS GIHVATPAEA RADCAAAGLD PRAIIGGFRW
|
|---|
| |