Gene Acry_1957 details

Gene Information

• Locus tag: Acry_1957
• ID: 5160982
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: -
• Start bp: 2146825
• End bp: 2147490
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640553878
• Product: OmpW family protein
• Protein accession: YP_001235077
• Protein GI: 148260950
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3047] Outer membrane protein W

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGCTT GCATGACGGC TGCCGGCGTC GCCGCGTTGC TCCTCGCCTC GGCGCTGCCG 
GCCGCCGCAC AGGTGACTGG CCCGACCGGC TTTCACGCCG GCGACATCCT CGTCCGCCTG 
CGGGCGGATG GCGTCCTGCC GCGCAATTCA TCGAGCGACG TATCGGTCAT CGGCGGTCAT 
GTGAAGGCGT CGGACACCGT GATTCCCGAG ATCGACCTCT CCTATTTCTT CACGCCCCAC 
ATCGCGGTGG AGGCGATCGC CGGCACCTCG CGCCACAATG TCGAGGTCAC CGGCTCGGCG 
CTCGGCACGG TGAAGGTGGG CAGCGTCTGG GTGCTGCCGC CCACCGTCAC ACTGCAATAC 
CATTTCGGCG GCATGGGGGA TTTCGTCCCC TATGTCGGTG CCGGCCTGTC GGTCCTGTTC 
TATTACGGCC AGAGTACCGC CTCCGACCTC AAGTCCCTCG GGCTCGACTC GGTAACCTAC 
CGCACGGGCA TCGGCCCGGC GATCGAGGCC GGGTTCGACT GGCACGTGCA GGGACGCTGG 
TATGCGAACT TCGTGGTCAA GCAGATCTTC GCCGGCACGC GGGCGAGCGT CGGCCATGGC 
ACGATCGTCG CGCATGCCGC GATCAACCCG ACGATTGTCG GCGCCGGCAT CGGCTACCGG 
TTCTGA 

 

Protein sequence

MKACMTAAGV AALLLASALP AAAQVTGPTG FHAGDILVRL RADGVLPRNS SSDVSVIGGH 
VKASDTVIPE IDLSYFFTPH IAVEAIAGTS RHNVEVTGSA LGTVKVGSVW VLPPTVTLQY 
HFGGMGDFVP YVGAGLSVLF YYGQSTASDL KSLGLDSVTY RTGIGPAIEA GFDWHVQGRW 
YANFVVKQIF AGTRASVGHG TIVAHAAINP TIVGAGIGYR F