Gene Acry_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1946 
SymbolrplC 
ID5160830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp2131955 
End bp2132638 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content66% 
IMG OID640553867 
Product50S ribosomal protein L3 
Protein accessionYP_001235066 
Protein GI148260939 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTGA TGCGCACCGG TATTATCGCG AAGAAGCTGG GCATGACCCG GTTGTTCAGG 
GAAGACGGCA CCCACGTGCC GGTGACCGTG CTGCACATGG ACGATGTGCG CGTGGTTGCC
GCCCGCACCA AGGAACGTGA CGGCTACGCG GCCGTTCAGC TCGGCTTCGG CCATGCCAAG
ACGAAGAACG TGACGAAGCC GATGAAGGGC CACTTCGCCG CGGCGAAGGT CGAGCCGGCG
AACCGGCTGG TCGAGTTCCG CGTCGCGGAC GATGCGGTGC TGGAAGCCGG CCAGGTGCTT
TCGGCGGCGC ATTTCACCGT CGGCCAGAAG GTCGATGTCG CCGGCATCAG CAAGGGCAAG
GGCTTCGCCG GCGGCATGAA GCGCTGGAAC TTCCGCGGCC TTGAGGCCTC GCACGGCGTC
TCGATCAGCC ATCGTTCGCT GGGGTCGACC GGTAACCGCC AGGATCCGGG CAAGACCTTC
AAGAACAAGA AGATGGCCGG CCATCTCGGC GGCGAGCGCA TCACGACCCT CAATCTCGAG
GTCGCGGCGA TCGATGAGGC GCGCAACCTC ATCATGATCA AGGGCGCGGT GCCGGGCGCC
AAGGACGGCT ACGTCCTGGT GCGCGACGCG GTCAAGACGG CCCGCCCGGC CGATGCTGCC
TATCCGGCGG CGCTGAAGGC CTGA
 
Protein sequence
MSVMRTGIIA KKLGMTRLFR EDGTHVPVTV LHMDDVRVVA ARTKERDGYA AVQLGFGHAK 
TKNVTKPMKG HFAAAKVEPA NRLVEFRVAD DAVLEAGQVL SAAHFTVGQK VDVAGISKGK
GFAGGMKRWN FRGLEASHGV SISHRSLGST GNRQDPGKTF KNKKMAGHLG GERITTLNLE
VAAIDEARNL IMIKGAVPGA KDGYVLVRDA VKTARPADAA YPAALKA