Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_1946 |
Symbol | rplC |
ID | 5160830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 2131955 |
End bp | 2132638 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640553867 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_001235066 |
Protein GI | 148260939 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTGA TGCGCACCGG TATTATCGCG AAGAAGCTGG GCATGACCCG GTTGTTCAGG GAAGACGGCA CCCACGTGCC GGTGACCGTG CTGCACATGG ACGATGTGCG CGTGGTTGCC GCCCGCACCA AGGAACGTGA CGGCTACGCG GCCGTTCAGC TCGGCTTCGG CCATGCCAAG ACGAAGAACG TGACGAAGCC GATGAAGGGC CACTTCGCCG CGGCGAAGGT CGAGCCGGCG AACCGGCTGG TCGAGTTCCG CGTCGCGGAC GATGCGGTGC TGGAAGCCGG CCAGGTGCTT TCGGCGGCGC ATTTCACCGT CGGCCAGAAG GTCGATGTCG CCGGCATCAG CAAGGGCAAG GGCTTCGCCG GCGGCATGAA GCGCTGGAAC TTCCGCGGCC TTGAGGCCTC GCACGGCGTC TCGATCAGCC ATCGTTCGCT GGGGTCGACC GGTAACCGCC AGGATCCGGG CAAGACCTTC AAGAACAAGA AGATGGCCGG CCATCTCGGC GGCGAGCGCA TCACGACCCT CAATCTCGAG GTCGCGGCGA TCGATGAGGC GCGCAACCTC ATCATGATCA AGGGCGCGGT GCCGGGCGCC AAGGACGGCT ACGTCCTGGT GCGCGACGCG GTCAAGACGG CCCGCCCGGC CGATGCTGCC TATCCGGCGG CGCTGAAGGC CTGA
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Protein sequence | MSVMRTGIIA KKLGMTRLFR EDGTHVPVTV LHMDDVRVVA ARTKERDGYA AVQLGFGHAK TKNVTKPMKG HFAAAKVEPA NRLVEFRVAD DAVLEAGQVL SAAHFTVGQK VDVAGISKGK GFAGGMKRWN FRGLEASHGV SISHRSLGST GNRQDPGKTF KNKKMAGHLG GERITTLNLE VAAIDEARNL IMIKGAVPGA KDGYVLVRDA VKTARPADAA YPAALKA
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