| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1940 |
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| Symbol | rpsC |
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| ID | 5160824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 2128684 |
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| End bp | 2129361 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640553861 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001235060 |
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| Protein GI | 148260933 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTCACA AAGTCAATCC GGTCGGGCTG CGGCTCGGCA TCAACCGCAC CTGGGACAGC
CGCTGGTTCG CGGGCGCCGA CTATGCGTCG CTGCTGCATG ACGACCTCAA GTTGCGCGAA
CATCTGCTCG GCCGCCTGTC CGGCGCCGGC GTCTCCAAGG TGCTGATCGA GCGTCCGGCG
AAGAAGCCGC GCGTGACGAT CTATGCCGCG CGTCCCGGCG TGGTCATCGG CAAGAAGGGT
CAGGACATCG AGGTGCTCAA GAAGGAGCTC TCCTCGATGG CGAAGGCCGA CGTGTCGCTG
AACATCGTCG AGATCCGCAA GCCCGAGATC GATGCCGCGC TGGTCGCCCA GAACATCGCC
CAGCAGCTCG AACGCCGCGT CGCGTTCCGC CGCGCCATGA AGCGCGCCGT CCAGTCGGCG
ATGCGCCTCG GCGCCCAGGG CATCCGGATC AACTGCAGCG GCCGTCTCGG CGGCGCCGAG
ATCGCCCGCA TGGAGTGGTA TCGCGAAGGT CGTGTGCCCC TGCACACGCT GCGCGCCGAC
ATCGATTTCG GCGTCGCCAC CGCGAAGACC ACCTATGGCA CCTGCGGCGT GAAGGTCTGG
ATCTTCAAGG GCGAGATCAT GGCTCACGAC CCGATGGCGC AGGACCGCCG CGCCGCCGAA
CAGGCGCCGC AGCGCTGA
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| Protein sequence | MGHKVNPVGL RLGINRTWDS RWFAGADYAS LLHDDLKLRE HLLGRLSGAG VSKVLIERPA
KKPRVTIYAA RPGVVIGKKG QDIEVLKKEL SSMAKADVSL NIVEIRKPEI DAALVAQNIA
QQLERRVAFR RAMKRAVQSA MRLGAQGIRI NCSGRLGGAE IARMEWYREG RVPLHTLRAD
IDFGVATAKT TYGTCGVKVW IFKGEIMAHD PMAQDRRAAE QAPQR
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