Gene Acry_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1924 
SymbolrpsM 
ID5160749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp2120809 
End bp2121186 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content64% 
IMG OID640553845 
Product30S ribosomal protein S13 
Protein accessionYP_001235044 
Protein GI148260917 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.38502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCGTA TTGCCGGCGT AAACATTCCT TCGAACAAGC GCGTGCTGAT CAGCCTGCGT 
TACATCTACG GCATCGGGCC CGCCAAGGCG CGCGAAATCT GCCAGTCCCT CGAGATCGGC
GAAGACAAGC GCGTGAACCA GCTCTCCGAA GACGAGATCA TGAAGATCCG CGAGCTGATC
GACAGGGACT ATCGCGTCGA GGGTGACCTG CGTCGCGAAG TCGCCATGAA CATCAAGCGG
CTGGTCGATC TCGGCTGCTA TCGCGGGTTG CGCCATCGCA AGGGCCTGCC GGTCCGCGGC
CAGCGCACCC ACACCAACGC CCGCACCCGC AAGGGCAAGG CGGTCGCGAT CGCCGGCAAG
AAGAAGGCGA CCCGCTAA
 
Protein sequence
MARIAGVNIP SNKRVLISLR YIYGIGPAKA REICQSLEIG EDKRVNQLSE DEIMKIRELI 
DRDYRVEGDL RREVAMNIKR LVDLGCYRGL RHRKGLPVRG QRTHTNARTR KGKAVAIAGK
KKATR