| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1902 |
|---|
| Symbol | |
|---|
| ID | 5160487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 2100000 |
|---|
| End bp | 2100983 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640553823 |
|---|
| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
|---|
| Protein accession | YP_001235022 |
|---|
| Protein GI | 148260895 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCC TGCCCACCGC CGAGGATGTT CTCGCCGCCC ACGCCCTGAT CGCCCCGCAC
ATCGTCCGCA CCCCGGCGCT GCGCTCTCCC GCGCTCGACG AGCGGACCGG CGCGGAGGTG
TTCATCAAGG CCGAGCCGCT GCAGCGCACC GGCAGCTTCA AGCTGCGCGG CGCGACCAAC
GCGATCCTGC GGCTCGCCCC CGCGGCGCGC GCGGCCGGCG TCGTCGCCTA TTCCTCGGGC
AATCACGGCC AGGCGGTGGC CTGCGCCGCC GCCGCCCTCG GGATTCCCGC CACCATCGTG
ATGCCGCGCG ACGCCCCCGC CATCAAGCGC GACTCGACCG CCGCCTGGGG GGCCGACATC
GTGCAGTACG ACCGCCGCAC CGAGGACCGC GAGGCGATCG GCGCCGCCAT CGCCGCCCGC
ACCGGCGCCG CCCTGATCCC CCCCTACGAC CATCCGGACG TGATCGCCGG GCAGGGCACC
CTCGCCCTCG AACTGGTGGA GGATGCGCGG GCGGCGGGCG CCGAACTCGA TCTCGTCTTC
GTCTGCACCG GCGGCGGCGG CCTGACCGCC GGCTGCGCCC TCGCCCTCGA ACACGCCTCG
CCCGCGACCC GGCTGATCGC CGTCGAGCCC GAGGGCTGGG ACGATACCGG CCGCTCGCTG
GCCGCCGGCA CCCGCCTCGC CAACGACGGC GCGGGCTCCG CGCTCTGCGA CGCGCTGATG
GCGATGACGC CCGGCGAACT CACCTTCGCG CTCAACGCGC CCCGCCTCGC CGGCGCCGTC
GCCGTCGGCG AGTCGCAGGT GCTCGCCGCG ATGGGCTTCG CGCTGCGCCA TCTCAAGCTC
GCGGTCGAGC CCGGCGGCGC GGTGGCGCTG GCGGCGGTGC TGGCCGAGGC GCTGCCGCTC
GACGGCCTGG CGGTGGGAGT CGTTCTCTCC GGCGGCAATG CCGATCCCGG AACGCTGGCC
CGCGCCCTCG AAGTCACCTG CTGA
|
|---|
| Protein sequence | MTRLPTAEDV LAAHALIAPH IVRTPALRSP ALDERTGAEV FIKAEPLQRT GSFKLRGATN
AILRLAPAAR AAGVVAYSSG NHGQAVACAA AALGIPATIV MPRDAPAIKR DSTAAWGADI
VQYDRRTEDR EAIGAAIAAR TGAALIPPYD HPDVIAGQGT LALELVEDAR AAGAELDLVF
VCTGGGGLTA GCALALEHAS PATRLIAVEP EGWDDTGRSL AAGTRLANDG AGSALCDALM
AMTPGELTFA LNAPRLAGAV AVGESQVLAA MGFALRHLKL AVEPGGAVAL AAVLAEALPL
DGLAVGVVLS GGNADPGTLA RALEVTC
|
|---|
| |