Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_1881 |
Symbol | sdhA |
ID | 5160350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 2072009 |
End bp | 2073820 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640553803 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001235002 |
Protein GI | 148260875 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAA TGTCGAAGCC GTCGCTCGGC GCCTACACGA TCATCGACCA TACCTATGAC GTCATCGTCG TCGGGGCCGG CGGGTCCGGC CTGCGGGCGA CGCTCGGCAT GGGCCAGGCC GGGCTGAAGA CCGCCTGCAT CAGCAAGGTG TTCCCGACCC GCAGCCATAC CGTGGCCGCG CAGGGCGGCA TCGGCGCGGC ACTCGGCAAC ATGGAGCCGG ACGACTGGCG CTGGCACATG TACGACACGG TCAAGGGCTC GGACTGGCTC GGTGATCAGG ACGCCATCGA ATACATGTGC CGCGAGGCGA TTCCGGCGAT TCACGAGCTG GAGCATTTCG GCGTGCCGTT CAGCCGCACC GAGGACGGCA AGATCTACCA GCGGCCGTTC GGCGGGCACA TGAAGGATTT CGGCCAGGCG CCGGTGCGCC GCGCCTGCGC CGCCGCCGAC CGCACCGGCC ACGCCATCCT GCACACGCTG TACCAGCAGA GCCTGAAGGC GGATGTGGAG TTCTTCGTCG AGTATTTCGC GACCGACCTC ATCATGGACG ACGAGGGCGC CTGCCGCGGG GTGATGGCCT GGTGCCTGGA GGACGGGACG ATCCACCGCT TCCGCGCGCA GCTGGTGGTG CTGGCGACCG GCGGCTATGG CCGCGCCTAT CTCTCCTGCA CCTCGGCGCA TACCTGCACC GGCGATGGCG GCGGCATGGC GCTGCGCGCC GGGCTGCCGA TGCAGGACAT GGAGTTCGTG CAGTTCCACC CGACGGGCAT TTTCCCGGCC GGCTGCCTGA TCACCGAGGG CGCGCGCGGC GAGGGCGGAT ACCTGACCAA CGCCGAGGGC GAGCGCTTCA TGGAGCGCTA CGCGCCGACG GCGAAGGACC TCGCCTCGCG CGACGTGGTC TCGCGCTCGA TGACGATCGA GATCATGGAA GGGCGCGGCT GCGGGCCGAA CAAGGACCAC ATCCTGCTGC ACCTCGAAGG GCTGAAGCCG GAGCAGCTGC ATGAGCGGCT GCCGGGGATT TCGGAGACCG CGCGGGTGTT CGCGGGCGTC GACGTGACCA AGGCGCCGAT CCCGGTGCTG CCGACCGTGC ATTACAACAT GGGCGGCATT CCGACGAACT ATCGCGCCGA GGTGCTGCGG CCGACCAAGG ACAATCCGGA CGCGATCGTG CCGGGGCTGA TGGCGGTGGG CGAGGCGGCG TGCGTTTCGG TGCACGGCGC GAACCGGCTC GGCACCAACT CGCTGCTCGA CCTCGTGGTG TTCGGCCGGG CGGCGGCGCA CCAGGCGGCC AAGGTGGTCA CGCCGGGCGC GAGCCAGCCC GCCCTGCCCG CCCGCGCCGG CGAGGCCTCG CTCGACCGGC TGGACGCGAC GCGCCACGCC AAGGGCGGCA CCACCGTGGC CGCACTCCGC GACCAGATGC AGCGGACGAT GCAGAACCAC GCCGCGGTGT TCCGCAACTC CAAGACGCTG AAGGAAGGTG TCGCGAAGAT GTCCGGCCTG TGGCAGGGGC TGAAGGACAT CTCGGTGTCC GATCGCGGGC TGATCTGGAA TTCCGACCTG ATGGAGGCGC TCGAGCTGCA CAACCTGATG GGCAACGCGA TCACCACCAT GGCCTCGGCC GAGGCGCGGC ACGAGAGCCG CGGGGCGCAC GCGCATGACG ACTTCCCCGA GCGCGACGAC GCCGAGTGGA TGAAGCATTC GCTCGCCCAT TGCACGGATG AAGGCGAGGT GGCGCTCGAC TACCGCCCGG TGCGGATGCA GACGCTGACC AACGACGTTT CGGTGTTCCC GCCGAAGAAG CGCGTCTACT GA
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Protein sequence | MNAMSKPSLG AYTIIDHTYD VIVVGAGGSG LRATLGMGQA GLKTACISKV FPTRSHTVAA QGGIGAALGN MEPDDWRWHM YDTVKGSDWL GDQDAIEYMC REAIPAIHEL EHFGVPFSRT EDGKIYQRPF GGHMKDFGQA PVRRACAAAD RTGHAILHTL YQQSLKADVE FFVEYFATDL IMDDEGACRG VMAWCLEDGT IHRFRAQLVV LATGGYGRAY LSCTSAHTCT GDGGGMALRA GLPMQDMEFV QFHPTGIFPA GCLITEGARG EGGYLTNAEG ERFMERYAPT AKDLASRDVV SRSMTIEIME GRGCGPNKDH ILLHLEGLKP EQLHERLPGI SETARVFAGV DVTKAPIPVL PTVHYNMGGI PTNYRAEVLR PTKDNPDAIV PGLMAVGEAA CVSVHGANRL GTNSLLDLVV FGRAAAHQAA KVVTPGASQP ALPARAGEAS LDRLDATRHA KGGTTVAALR DQMQRTMQNH AAVFRNSKTL KEGVAKMSGL WQGLKDISVS DRGLIWNSDL MEALELHNLM GNAITTMASA EARHESRGAH AHDDFPERDD AEWMKHSLAH CTDEGEVALD YRPVRMQTLT NDVSVFPPKK RVY
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