Gene Acry_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1881 
SymbolsdhA 
ID5160350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp2072009 
End bp2073820 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content69% 
IMG OID640553803 
Productsuccinate dehydrogenase flavoprotein subunit 
Protein accessionYP_001235002 
Protein GI148260875 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAA TGTCGAAGCC GTCGCTCGGC GCCTACACGA TCATCGACCA TACCTATGAC 
GTCATCGTCG TCGGGGCCGG CGGGTCCGGC CTGCGGGCGA CGCTCGGCAT GGGCCAGGCC
GGGCTGAAGA CCGCCTGCAT CAGCAAGGTG TTCCCGACCC GCAGCCATAC CGTGGCCGCG
CAGGGCGGCA TCGGCGCGGC ACTCGGCAAC ATGGAGCCGG ACGACTGGCG CTGGCACATG
TACGACACGG TCAAGGGCTC GGACTGGCTC GGTGATCAGG ACGCCATCGA ATACATGTGC
CGCGAGGCGA TTCCGGCGAT TCACGAGCTG GAGCATTTCG GCGTGCCGTT CAGCCGCACC
GAGGACGGCA AGATCTACCA GCGGCCGTTC GGCGGGCACA TGAAGGATTT CGGCCAGGCG
CCGGTGCGCC GCGCCTGCGC CGCCGCCGAC CGCACCGGCC ACGCCATCCT GCACACGCTG
TACCAGCAGA GCCTGAAGGC GGATGTGGAG TTCTTCGTCG AGTATTTCGC GACCGACCTC
ATCATGGACG ACGAGGGCGC CTGCCGCGGG GTGATGGCCT GGTGCCTGGA GGACGGGACG
ATCCACCGCT TCCGCGCGCA GCTGGTGGTG CTGGCGACCG GCGGCTATGG CCGCGCCTAT
CTCTCCTGCA CCTCGGCGCA TACCTGCACC GGCGATGGCG GCGGCATGGC GCTGCGCGCC
GGGCTGCCGA TGCAGGACAT GGAGTTCGTG CAGTTCCACC CGACGGGCAT TTTCCCGGCC
GGCTGCCTGA TCACCGAGGG CGCGCGCGGC GAGGGCGGAT ACCTGACCAA CGCCGAGGGC
GAGCGCTTCA TGGAGCGCTA CGCGCCGACG GCGAAGGACC TCGCCTCGCG CGACGTGGTC
TCGCGCTCGA TGACGATCGA GATCATGGAA GGGCGCGGCT GCGGGCCGAA CAAGGACCAC
ATCCTGCTGC ACCTCGAAGG GCTGAAGCCG GAGCAGCTGC ATGAGCGGCT GCCGGGGATT
TCGGAGACCG CGCGGGTGTT CGCGGGCGTC GACGTGACCA AGGCGCCGAT CCCGGTGCTG
CCGACCGTGC ATTACAACAT GGGCGGCATT CCGACGAACT ATCGCGCCGA GGTGCTGCGG
CCGACCAAGG ACAATCCGGA CGCGATCGTG CCGGGGCTGA TGGCGGTGGG CGAGGCGGCG
TGCGTTTCGG TGCACGGCGC GAACCGGCTC GGCACCAACT CGCTGCTCGA CCTCGTGGTG
TTCGGCCGGG CGGCGGCGCA CCAGGCGGCC AAGGTGGTCA CGCCGGGCGC GAGCCAGCCC
GCCCTGCCCG CCCGCGCCGG CGAGGCCTCG CTCGACCGGC TGGACGCGAC GCGCCACGCC
AAGGGCGGCA CCACCGTGGC CGCACTCCGC GACCAGATGC AGCGGACGAT GCAGAACCAC
GCCGCGGTGT TCCGCAACTC CAAGACGCTG AAGGAAGGTG TCGCGAAGAT GTCCGGCCTG
TGGCAGGGGC TGAAGGACAT CTCGGTGTCC GATCGCGGGC TGATCTGGAA TTCCGACCTG
ATGGAGGCGC TCGAGCTGCA CAACCTGATG GGCAACGCGA TCACCACCAT GGCCTCGGCC
GAGGCGCGGC ACGAGAGCCG CGGGGCGCAC GCGCATGACG ACTTCCCCGA GCGCGACGAC
GCCGAGTGGA TGAAGCATTC GCTCGCCCAT TGCACGGATG AAGGCGAGGT GGCGCTCGAC
TACCGCCCGG TGCGGATGCA GACGCTGACC AACGACGTTT CGGTGTTCCC GCCGAAGAAG
CGCGTCTACT GA
 
Protein sequence
MNAMSKPSLG AYTIIDHTYD VIVVGAGGSG LRATLGMGQA GLKTACISKV FPTRSHTVAA 
QGGIGAALGN MEPDDWRWHM YDTVKGSDWL GDQDAIEYMC REAIPAIHEL EHFGVPFSRT
EDGKIYQRPF GGHMKDFGQA PVRRACAAAD RTGHAILHTL YQQSLKADVE FFVEYFATDL
IMDDEGACRG VMAWCLEDGT IHRFRAQLVV LATGGYGRAY LSCTSAHTCT GDGGGMALRA
GLPMQDMEFV QFHPTGIFPA GCLITEGARG EGGYLTNAEG ERFMERYAPT AKDLASRDVV
SRSMTIEIME GRGCGPNKDH ILLHLEGLKP EQLHERLPGI SETARVFAGV DVTKAPIPVL
PTVHYNMGGI PTNYRAEVLR PTKDNPDAIV PGLMAVGEAA CVSVHGANRL GTNSLLDLVV
FGRAAAHQAA KVVTPGASQP ALPARAGEAS LDRLDATRHA KGGTTVAALR DQMQRTMQNH
AAVFRNSKTL KEGVAKMSGL WQGLKDISVS DRGLIWNSDL MEALELHNLM GNAITTMASA
EARHESRGAH AHDDFPERDD AEWMKHSLAH CTDEGEVALD YRPVRMQTLT NDVSVFPPKK
RVY