Gene Acry_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1876 
Symbol 
ID5160267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp2068787 
End bp2069503 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content75% 
IMG OID640553798 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_001234997 
Protein GI148260870 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.115169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTCGC TCATCCGTCT GCACCTTCCA TCACCCTTGT CGCCCGGCGC GACCCTTGCC 
ACATCCGCGG CCCAGGCGCA CTACCTCGGC GCCGTGATGC GCCGCCGCGC CGGCGATCCG
CTGCTGGTCT TCAACGCCGG TTCCGGCGAA TTCGCCGCGA CGATCGGCGC GCTCGACCGC
CGCGCCGCCA CCCTCGTCCT CGGCGCGCGC ACCCGCGCGC CCGAACCCGA ACCCGATTGC
TGGCTCTGCT TCGCCCCGCT CCGGCGCGAC ATGACCGAAC TCGTCGTCGA GAAGGCCACC
GAGCTCGGCG TCTCCCGCCT CGTGCCCGTG CTCACCGCCC GCACCCAGCC CGCCCGCCTG
CGCGCCGACC GCCTCGCCGC CATCGCCACC GAGGCCGCCG AACAGTCCGA GCGCCTGACC
ATCCCCGACA TCGCCGAGCC GGCCCCGCTC GCGGCGTTTC TCGCCGCCTT CCCGCCGTCC
CGCCGCCTCT TCGTCGCCGC CGAGCGCCAC GCCGCCCCGC CCCTGTCGCC GGCCGATCCG
CTTCAACCCC ACGCCCTCCT GGTCGGCCCC GAAGGCGGCC TTGCGCCGGA GGAGCTTGAC
GCCATGGCCC GCCATGCGTT TGTGTCGCCG GTAACCCTCG GACCGCGCAT CCTGCGCGCC
GAAACCGCCG CCATCGCCGG GCTCGCGCGT CTGCTCGCGG GGTCCGCGCC CAGCTGA
 
Protein sequence
MASLIRLHLP SPLSPGATLA TSAAQAHYLG AVMRRRAGDP LLVFNAGSGE FAATIGALDR 
RAATLVLGAR TRAPEPEPDC WLCFAPLRRD MTELVVEKAT ELGVSRLVPV LTARTQPARL
RADRLAAIAT EAAEQSERLT IPDIAEPAPL AAFLAAFPPS RRLFVAAERH AAPPLSPADP
LQPHALLVGP EGGLAPEELD AMARHAFVSP VTLGPRILRA ETAAIAGLAR LLAGSAPS