Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_1876 |
Symbol | |
ID | 5160267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 2068787 |
End bp | 2069503 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640553798 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001234997 |
Protein GI | 148260870 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.115169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCTCGC TCATCCGTCT GCACCTTCCA TCACCCTTGT CGCCCGGCGC GACCCTTGCC ACATCCGCGG CCCAGGCGCA CTACCTCGGC GCCGTGATGC GCCGCCGCGC CGGCGATCCG CTGCTGGTCT TCAACGCCGG TTCCGGCGAA TTCGCCGCGA CGATCGGCGC GCTCGACCGC CGCGCCGCCA CCCTCGTCCT CGGCGCGCGC ACCCGCGCGC CCGAACCCGA ACCCGATTGC TGGCTCTGCT TCGCCCCGCT CCGGCGCGAC ATGACCGAAC TCGTCGTCGA GAAGGCCACC GAGCTCGGCG TCTCCCGCCT CGTGCCCGTG CTCACCGCCC GCACCCAGCC CGCCCGCCTG CGCGCCGACC GCCTCGCCGC CATCGCCACC GAGGCCGCCG AACAGTCCGA GCGCCTGACC ATCCCCGACA TCGCCGAGCC GGCCCCGCTC GCGGCGTTTC TCGCCGCCTT CCCGCCGTCC CGCCGCCTCT TCGTCGCCGC CGAGCGCCAC GCCGCCCCGC CCCTGTCGCC GGCCGATCCG CTTCAACCCC ACGCCCTCCT GGTCGGCCCC GAAGGCGGCC TTGCGCCGGA GGAGCTTGAC GCCATGGCCC GCCATGCGTT TGTGTCGCCG GTAACCCTCG GACCGCGCAT CCTGCGCGCC GAAACCGCCG CCATCGCCGG GCTCGCGCGT CTGCTCGCGG GGTCCGCGCC CAGCTGA
|
Protein sequence | MASLIRLHLP SPLSPGATLA TSAAQAHYLG AVMRRRAGDP LLVFNAGSGE FAATIGALDR RAATLVLGAR TRAPEPEPDC WLCFAPLRRD MTELVVEKAT ELGVSRLVPV LTARTQPARL RADRLAAIAT EAAEQSERLT IPDIAEPAPL AAFLAAFPPS RRLFVAAERH AAPPLSPADP LQPHALLVGP EGGLAPEELD AMARHAFVSP VTLGPRILRA ETAAIAGLAR LLAGSAPS
|
| |