| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1864 |
|---|
| Symbol | |
|---|
| ID | 5160629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 2055675 |
|---|
| End bp | 2057474 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640553786 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001234985 |
|---|
| Protein GI | 148260858 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGGT CGATCGCCAA GTTCCTGCCC TTCATCGCGC TGCTCGTGCT GATTCCCTTC
CTGCTGCCGG GCGGGCGGCT GGGCTCGTAT TATCTCACGC TGCTGATCCT CTCGCTGTCC
TACGCCGTCG CGGCCCTGGG GCTGACCGTT CTGCTCGGCT ATTCGGGGCA GATCTCGCTG
GCGCAGGCAG CGTTTTTCGG GATCGGCGCC TATACGTTCT CTATCCTCGC GGTGAACCAC
CACATCGGCT ACTGGAGCGC GGCGCTGGCG GCGGTGGCGG TGACGACCGG GTTCGGCCTG
TTCCTCGGCG CGATCTCGCT CAGGCTCGCC AGCCACTATC TCGCGCTGGT GACGATCGGC
TTTCAGATCA TCACCGAACT CGTGCTGAAC AACTGGAACG CGGTGACCGA CGGCGCCGAC
GGGATTTCCA ACATCCCCCG GCCGAGCCTG TTCGGCTACG CGATCAACAG CGATCACGGG
TTCTATTTCA TCTCCGTCGC GGTGCTGGTG CTGGCGAGCT ATGTCGTGTT CCGCCTGCGC
CATTCGCGGC TGGGCGGGGC GCTGTTCGCC CTGCGCGAGG ACGAGATCGC CGCTTCGGCA
AACGGGATCA GCCTGTTCCG GACCAAGGTT CTCGCCTTCG CCGTCTCCGC GGCGCTCGCC
GCGATGGGCG GGATTCTCTA CGCTTCCGGC TCGCTCTATA TCAGCCCGAA CGTCTTCAAT
TTCTATCAGT CGGTCTCGTT CTTCGCGATG GCGCTGGTGG GCGGGCAGGC CTCGATCGTC
GGCACCACGC TGGGTGCGGG GCTGATCACC TTCCTGCCGG AAGTGCTGCG CTTCCTGCAT
GCCTATTACA TCGCGGTCTA TGGCGTGCTG GTCGTCGTCG TCGTGCTGTT CATGCCGGAA
GGGCTGTACG GGTTGCTGCT CCGCGGCGTC GGCGCGGTGG CGACGCTGGT GGCGGGCCGG
CGGCGCTCTG ACGAGGAAGA GGTGGCGCAT CTCGAGGCCG GCGCCGTGCC CGAGCGGCCG
GTGGCCTCGG ACCGGCCGCT TCTGGAAATT CGAGATCTGG CCAAGCATTT CGGCGGCATC
AAGGCGGTCA ACGGCGTGTC GCTCACGGTC AACCGGGGCG ATGTCGCGGT GCTGATCGGG
CCGAACGGAT CGGGCAAGAC GACGGTGCTG AACGTGCTGA GCGGGATCTA TACGGCGACG
GCAGGATCGA TCGTCTATGA CGGGAAGGAG ATCACCAATC TCGGCCCGGC GCGGATCAAC
CGGCTCGGCA TTTCCCGCAC CTTCCAGAAC ATCCGCCTGT TCCCCGAACT CACCGCGTTG
GAAAATGTGG CGGTCGGTTA TTACCGGCGC GGCACGGTCG GGCTTGCGGG CGCGTTGCTC
TCGCGGCCGC GCGGTTATCG CGAGGAACGC GAGGCGATGG AAAAGGCGAG GGAAACGCTG
CATTTCCTCG GTTTCGCCCG GCTCGGCGTG AAGGCGAAGA ACCTGCCGTA CGGGCAGCAG
CGCATCGTCG AGATCGCGCG GGCGATCGTC TCCGGCCCCG AACTCCTGCT GCTTGACGAG
CCGGCGGCGG GGATGAACCA CGAGGAAACC GAGGTGCTGT CGCAGATCCT CTACCGGATC
CATGCGCGGG GGATGACGAT GCTGCTGATC GAGCACGACA TGAGCTTCGT CTCCAGTGTT
GCGACGCGGG CCTATGTGAT GGATTTCGGC CAGAAGATCA GCGAGGGTTC GGTGAAGCAG
GTGCTGTCGG ATCCTGCCGT GATGAAGGCG TATCTGGGTG ACGATGTCGA ATATGCTTGA
|
|---|
| Protein sequence | MTRSIAKFLP FIALLVLIPF LLPGGRLGSY YLTLLILSLS YAVAALGLTV LLGYSGQISL
AQAAFFGIGA YTFSILAVNH HIGYWSAALA AVAVTTGFGL FLGAISLRLA SHYLALVTIG
FQIITELVLN NWNAVTDGAD GISNIPRPSL FGYAINSDHG FYFISVAVLV LASYVVFRLR
HSRLGGALFA LREDEIAASA NGISLFRTKV LAFAVSAALA AMGGILYASG SLYISPNVFN
FYQSVSFFAM ALVGGQASIV GTTLGAGLIT FLPEVLRFLH AYYIAVYGVL VVVVVLFMPE
GLYGLLLRGV GAVATLVAGR RRSDEEEVAH LEAGAVPERP VASDRPLLEI RDLAKHFGGI
KAVNGVSLTV NRGDVAVLIG PNGSGKTTVL NVLSGIYTAT AGSIVYDGKE ITNLGPARIN
RLGISRTFQN IRLFPELTAL ENVAVGYYRR GTVGLAGALL SRPRGYREER EAMEKARETL
HFLGFARLGV KAKNLPYGQQ RIVEIARAIV SGPELLLLDE PAAGMNHEET EVLSQILYRI
HARGMTMLLI EHDMSFVSSV ATRAYVMDFG QKISEGSVKQ VLSDPAVMKA YLGDDVEYA
|
|---|
| |