| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1836 |
|---|
| Symbol | |
|---|
| ID | 5159797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 2027097 |
|---|
| End bp | 2028521 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640553758 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001234957 |
|---|
| Protein GI | 148260830 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | [TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGA CCCTGTTCCT GCAACCGCCC TCCTTCGACG GGTTCGACGG CGGCGCCGGC
TCCCGCTACC AGGCGCGCCG CGAGATCCGG TCCTTCTGGT TCCCGACCTG GCTCGCCCAG
CCGGCGGCGC TGATCCCCGG CTCCAAACTG ATCGACGCGC CTCCCGCCGG CCTCACGATG
AAGGATGTGA TGCCGCACGC CCGCGCCGCC GAGCTCGTCA TCATCCACAC CTCCACGCCG
TCCTTCGCCA ACGACGTCAA GGTCGCGGCC CAGATCAGGG CGGAGAACCC CGGCGTGAAG
ATCGGCTTCA TCGGCGCGAA GGTGGCGGTC CAGGCCGGCG AAAGCCTCGA GCGCGCCGCC
CCTGTCGACT TCGTCGCCCG CAACGAGTTC GACTTCACGA TCAAGGAAAT CGCCGAGGGC
AAGCCCTTCG CCGAGGTCGA AGGCATTTCC TGGCGCAACG AGGCCGGCGA GATCGTCCAC
AACCAGGACC GCCCCACCCT CGAGGACATG GACAGCCTTC CCTTCGTCGC CGACGTCTAC
AAGCGCGACC TGAAGATCGA GGACTATTTC ATCGGCTATC TGATGCACCC CTACGTGTCG
CTGTATACCG GCCGGGGCTG CAAGTCGCGC TGCACCTTCT GCCTCTGGCC GCAGACGGTC
GGCGGCCACC GCTACCGCAC CCGCTCGGTC GAGCACGTGA TCGCCGAGGT GAAGCAGATC
CAGCGCGATT TCCCGCAGAT GCGCGAGCTC TTCTTCGACG ACGACACCTT CACCGACAAC
CTTCCCCGCG CCGAGGCGAT CGCGCGCGAA CTCGGCAAGC TCGGCGTCAC CTGGTCCTGC
AATGCCAAGG CGAACGTTCC CCGCGACACG CTCAAGGTGC TGCGCGACAA TGGTCTTCGT
CTGCTGCTCG TCGGCTATGA AAGCGGCAAC CAGCAGATCC TGCACAACAT CAAGAAGGGC
ATGCGGATCG AGGTCGCGAA GAAATTCACG AAGGACTGCC ACGATCTCGG CATCAAGATC
CACGGCACCT TCATTCTCGG CCTGCCCGGC GAAACGCAGG ACACCATCCG CGAGACGATC
GATTTCGCGA AGGAGATCAA CCCGCATACC ATCCAGGTCT CCCTCGCCGC GCCATACCCA
GGCACCTTCC TTTACAACCA GGCCGTCGAA AACGGCTGGC TCGACGCGGC GCATGCCGAA
CTGATCGACG ATCACGGGAT CCAGATCGCG CCGCTCCACT ACCCGCATCT GACGCACACC
GAAATCTTCG ACAGCGTGGA AACCTTCTAC CGGCAGTTCT ATTTCCGCGT GCCGAAGATC
GCCTCGATTG TCGGCGAGAT GGTGCGCAGC CCGCAAATGA TGAAGCGCCG CCTGCGCGAG
GGCGTGGAGT TCTTCCAGTT CCTGCGCGAG CGCCACGCCG CCTGA
|
|---|
| Protein sequence | MMKTLFLQPP SFDGFDGGAG SRYQARREIR SFWFPTWLAQ PAALIPGSKL IDAPPAGLTM
KDVMPHARAA ELVIIHTSTP SFANDVKVAA QIRAENPGVK IGFIGAKVAV QAGESLERAA
PVDFVARNEF DFTIKEIAEG KPFAEVEGIS WRNEAGEIVH NQDRPTLEDM DSLPFVADVY
KRDLKIEDYF IGYLMHPYVS LYTGRGCKSR CTFCLWPQTV GGHRYRTRSV EHVIAEVKQI
QRDFPQMREL FFDDDTFTDN LPRAEAIARE LGKLGVTWSC NAKANVPRDT LKVLRDNGLR
LLLVGYESGN QQILHNIKKG MRIEVAKKFT KDCHDLGIKI HGTFILGLPG ETQDTIRETI
DFAKEINPHT IQVSLAAPYP GTFLYNQAVE NGWLDAAHAE LIDDHGIQIA PLHYPHLTHT
EIFDSVETFY RQFYFRVPKI ASIVGEMVRS PQMMKRRLRE GVEFFQFLRE RHAA
|
|---|
| |