| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1831 |
|---|
| Symbol | |
|---|
| ID | 5159918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 2020749 |
|---|
| End bp | 2021900 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640553753 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001234952 |
|---|
| Protein GI | 148260825 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTGC CGCTGAAGCA GGCGATCAAG GTTGGAGCCT ACGTGCTGAA ACAGCATTTG
ACCGGCAATC GGCGGTATCC GCTGGTGCTG ATGCTGGAGC CGCTGTTCCG CTGTAACCTG
GCTTGCGCCG GTTGCGGCAA GATCGATTAT CCCGCACCGA TTCTGAATCA GCGCCTGTCG
GTTGCCGACG CGCTGGAAGC CGTGGATGAG TGTGGCGCTC CGGTTGTGGC GATTGCTGGC
GGCGAGCCGC TGCTGCACCG GGAAATGCCC GAGATCGTCG AGAAGATCCT GGCGCGGGAC
AAGTTCATCT ATCTCTGCAC GAATGCGCTG CTGCTCGAGA AGAAGATCGA CCAGTACAAG
CCGCACCCGA ATTTCTGCTG GGACATTCAT CTCGACGGCG ATCGCGAGAT GCATGACCAG
GCGGTCAGTC AGGAAGGCGT CTACGAACGT GCCGTTGCCG CGATCAAACT GGCCAAGGCA
AAGGGATTCC GTGTTTCGAT CAACTGCACA TTGTTCGACG GAGCCAATCC CGAGCGGGTC
GCCGCGTTCC TCGATACCGT GAACGAAATC GGCGTCGATG GGGTCATGAC GTCCCCGGGT
TATGCCTATG AGCGTGCCCC GGATCAGGAA CATTTCCTTA ACCGTCAGCG GACGAAAGAA
CTTTTCCGGG CGATCTTCCG CCATGGAAAG GAGCGGAAGG CGCGCGGAAT TCGCTGGAAA
TTCAATCAGT CTCCCCTCTT TCTCGACTTC CTGGCCGGCA ATCAGACCTA CAAGTGCACG
CCCTGGGGCA ACCCGACGCG CAACGTGTTT GGTTGGCAGC GGCCTTGCTA CCTAATCGGG
GAAGGCTACG CAAAGACGTA CAAGGAGCTG ATGGAGACAA CCGATTGGGA CAAATATGGT
GTCGGCAATT ATGAAAAATG CGCCGACTGC ATGGTCCACT CGGGCTTCGA GGCGACTGCG
GTGGTTGACT CGGTCAAGCG CCCCTGGAAA TTGGCCAAGC TTGCGGTGAC GGGGATCCGT
ACCGAAGGCG CCATGGCGGC AGATATCCCG CTTGATCATC AGCGGCCGGC GGAGTTTGTG
TTCTCACGGC ACGTCGAACA CAAGATGGCG GAGATCCAGG GAACCGAGGA ACCGGCCGAA
CCCGCGGAGT AA
|
|---|
| Protein sequence | MGVPLKQAIK VGAYVLKQHL TGNRRYPLVL MLEPLFRCNL ACAGCGKIDY PAPILNQRLS
VADALEAVDE CGAPVVAIAG GEPLLHREMP EIVEKILARD KFIYLCTNAL LLEKKIDQYK
PHPNFCWDIH LDGDREMHDQ AVSQEGVYER AVAAIKLAKA KGFRVSINCT LFDGANPERV
AAFLDTVNEI GVDGVMTSPG YAYERAPDQE HFLNRQRTKE LFRAIFRHGK ERKARGIRWK
FNQSPLFLDF LAGNQTYKCT PWGNPTRNVF GWQRPCYLIG EGYAKTYKEL METTDWDKYG
VGNYEKCADC MVHSGFEATA VVDSVKRPWK LAKLAVTGIR TEGAMAADIP LDHQRPAEFV
FSRHVEHKMA EIQGTEEPAE PAE
|
|---|
| |