| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1781 |
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| Symbol | |
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| ID | 5161493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 1961064 |
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| End bp | 1962617 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640553698 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001234903 |
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| Protein GI | 148260776 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0863506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGGCAT TGCGAGCGAA ACCGGGATGG CGGCGTCGGG CCGCGCTCTG GGCCGCGCTG
CCGATGGCGG CGCTGCTGGC GGCGCCGGCG GCGCGGGCCG GCGACGCAAG GCCCTCGACC
CTGACCGCGG CGCTGGCGGA AGCCTATTCG AACAATCCGA CCCTGCAGGA ACAGCGGGCG
ACGCTGCGCG CCACCGACGA GAACGTGCCG GCGGCGCTTT CCGGCTGGCG GCCCACCGTC
ACGATCCAGG GGTCGGCCGG GCGCGTCGAC GAGACCACGG AATCCGCGTT CAACACCACC
AATCCGTTCA CCGGCACGCC AACCCTGACG CGCAACAGCC TGACCGCGGC GCGCAACGAC
GCGACCGGGC AGATCACCGT CAACCAGTCG ATCTTCGATG GCGGGCTGAC CGCCGCCAAG
CTGCATGAGG CGAAGAACAG CGTCTACGCC GCCAGGGCGC AGCTGCTCGC GACCGAGCAG
ACCGTCTTCG CCAAGGTGGT CAATGCCTAC GTGACCGTCA TCACCGACCG TCACCTGCTC
GATCTCGACA TCAACAACGA GAACGTCCTC GCCCAGCAGC TGCGCGCAGT GAAGGACCAG
TTCAATGTCG GCGAGATCAC CGAAACCTCG GTGGCGCAGG CCGAGGCCTC GCTCGCCGGG
GCGCAGGAAC AGGTCGCGGT GGCGAAGGGC AACCTGCATA TCGCCGACGA GAGCTTCCGC
CAGCTTGTCG GCTCCTATCC GGCGCGGACA CTGGTGCCGC CGCAGCCGCT CGAACTGCCG
GTGCGGGGCA AGACCCCCCT CGCCCATGCC GCGCTGCGCA ACAATCCCGA CGTGGTGGCG
GCGCTGTTCA CCATGGCGTC GAAGAAGGAT TCGGTCGATG CCGCGGTGGC CGGGCTCGGG
CCGCAGCTCT CCCTCTCGGC CTCGGCCTTC GACGAGTCGA ACCCCGGCGG GCCGCATTCG
CGCTCCACCG GCGGGCAGAT CCTCGCCAAC CTGACCATCC CGCTCTACCA GGGCGGCAAG
GAATATGCCG CGATCCGGCA GGCGCGGGAC AATGTGCAGT ATGCCTATTC GGCGGTGATC
GACGCCCAGC GGACGGCGGT GCAGCAGGCG ACCCAGGCAT GGGAGGGGCT GAAGGCCTCG
AAGGCGGCGA TCGTCAGCAC CCGCGCGCAG ATCAAGGCCG ACGCGATCGC GCTCGACGGC
ACCGAGCGGC AGGAAATCGT CGGCACGCGC GACACGCTCG ACGTGCTGAA CGCGCAGCAG
CTCCTGTTCA ACGCGCAGAC CACGCAGATC CAGAACATCG CCAACGAGGT CGAGCAGTCC
TATGCGATCG CCGCCGCGAT CGGCCGGCTG ACGGCGACCG ATCTCGCCCT GCCGGTGACG
CATTACGACG ACCTCAAATA CTACGACACC GTGAAGGACG CCCTGTTCGG CAATGGCGAC
GTCGCGTTCC GCAACGCCGG CATCGCCCCG GACGGCACCC TTCTCGCCCG GCCCAAAATG
GCGCCAAGCG GCCCGACCGA ACTGCATATC CAGCCCGAGG ACACACACCC ATGA
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| Protein sequence | MQALRAKPGW RRRAALWAAL PMAALLAAPA ARAGDARPST LTAALAEAYS NNPTLQEQRA
TLRATDENVP AALSGWRPTV TIQGSAGRVD ETTESAFNTT NPFTGTPTLT RNSLTAARND
ATGQITVNQS IFDGGLTAAK LHEAKNSVYA ARAQLLATEQ TVFAKVVNAY VTVITDRHLL
DLDINNENVL AQQLRAVKDQ FNVGEITETS VAQAEASLAG AQEQVAVAKG NLHIADESFR
QLVGSYPART LVPPQPLELP VRGKTPLAHA ALRNNPDVVA ALFTMASKKD SVDAAVAGLG
PQLSLSASAF DESNPGGPHS RSTGGQILAN LTIPLYQGGK EYAAIRQARD NVQYAYSAVI
DAQRTAVQQA TQAWEGLKAS KAAIVSTRAQ IKADAIALDG TERQEIVGTR DTLDVLNAQQ
LLFNAQTTQI QNIANEVEQS YAIAAAIGRL TATDLALPVT HYDDLKYYDT VKDALFGNGD
VAFRNAGIAP DGTLLARPKM APSGPTELHI QPEDTHP
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