Gene Acry_1764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1764 
SymbolmnmA 
ID5161789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand- 
Start bp1947117 
End bp1948154 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content73% 
IMG OID640553680 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_001234886 
Protein GI148260759 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.203932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGTCG TCGTCGCCAT GTCCGGCGGG GTGGACAGTT CGGTCGTCGC CGGGCTGATG 
CACGAGGCCG GGCACGAGGT GATCGGCGTC ACCCTCCAGC TCTACGATCA CGGCGCGGCC 
ACCGGCCGCA AGGGGGCCTG CTGCGCCGGG CAGGACATCC ACGACGCCCG CAACGTCGCC 
GACCGTCTCG GCATCGCCCA TTACGTGATC GACGCCGAGG CCGCCTTCCG CGCCGCGGTG 
ATCGGCGATT TCGCCGAATC CTACGCCGAG GGCCGCACCC CCGTGCCCTG CGTGCGCTGC 
AACCAGCACC TCAAGTTCGG CGACCTGCTC GGCCTCGCCC GCGATCTCGG CGCCGAGGCG 
CTGGCCACCG GCCACTATGT CCGCCGCGAG GACGGGCCGG AGGGAGCGGA GCTTCACCGC 
GCGGTCGATG CACGGCGCGA CCAGTCCTGG TTCCTCTTCG CCACCACGCG CGACCAGCTC 
GCATTCTCCC GCTTCCCCCT CGGCACCATG CCGGACAAGG ACGCCGTCCG CGCCGAGGCC 
GCGCGGATGA ACCTGCCCGT CGCCGAAAAG CCGGACAGCC AGGACATCTG CTTCGTCCCC 
TCCGGCACCT ATGCCGACAT CGTCGCGAAG CTCCGCCCCG ATGCCGCCGC CCCCGGCGAG 
ATCGTCACCG AGGACGGCGC CGTGCTCGAC CGTCACCAGG GCATCGCCCG CTACACGGTG 
GGCCAGGCCA AGCGCCTCGG CGCCGCCTCC GGCCATGTCG TCACCCGGAT CGACGCCGCC 
CGCCGCCGCA TCGTCGTCGG CCCCCGCGGC GCCGGCGGTC GCGAGGTGCG GATCGCCGAG 
CCGAACTGGC TGATCGATCC GCCCGCCGCC CCGTTCCGCG CCAGCGTCAA GCTCCGCGCC 
GGCGAGACGC CGCACCCCGC CGAGATCGAC ATCGCCCGCA ACCTCGTCAC CCTCGACACC 
CCCGCTCTCG CCGCCCCCGG CCAGGCCTGC GTCGTCTATC GCGAGTCCCG CGTTCTGGGA 
GGCGGTTTCA TTTTATGA
 
Protein sequence
MRVVVAMSGG VDSSVVAGLM HEAGHEVIGV TLQLYDHGAA TGRKGACCAG QDIHDARNVA 
DRLGIAHYVI DAEAAFRAAV IGDFAESYAE GRTPVPCVRC NQHLKFGDLL GLARDLGAEA 
LATGHYVRRE DGPEGAELHR AVDARRDQSW FLFATTRDQL AFSRFPLGTM PDKDAVRAEA 
ARMNLPVAEK PDSQDICFVP SGTYADIVAK LRPDAAAPGE IVTEDGAVLD RHQGIARYTV 
GQAKRLGAAS GHVVTRIDAA RRRIVVGPRG AGGREVRIAE PNWLIDPPAA PFRASVKLRA 
GETPHPAEID IARNLVTLDT PALAAPGQAC VVYRESRVLG GGFIL