| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1741 |
|---|
| Symbol | |
|---|
| ID | 5161566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 1919196 |
|---|
| End bp | 1920908 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640553658 |
|---|
| Product | Pyrrolo-quinoline quinone |
|---|
| Protein accession | YP_001234864 |
|---|
| Protein GI | 148260737 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4993] Glucose dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCCA GATTTGCCAG AACCGGAACC GCGCTGATCG GCGCCCTCGC CGGCACGCTG
CTCGCCGCCG GCGCCGCCTC GGCCCAGCCC GCCTACCCGA GCGTTACCCA GGCCCGGCTC
GACAACGCCG CCGCCTCGAA GGGCTGGCTG ATGTTCAACC GCAGCTACGC CGGCGACGAT
TACGCGCCGT TTGCGCAGAT CAACACGAAG AACGTCGCCT CGCTGAAACC CGCGTGGTCG
TCTGCGAAAA TCGACATCCC CAACGGCTTC GAGGGCACGC CGATCGTCAA TGGCGACTAC
ATGTTCGCCA CCACTCCGCT CGACCATCTC ATCGCCTTCA ACGCGAAGAC CGGCCAGAAA
CTCTGGGAAT ACGACTACGA CCTGCCGAAG ACCGCGCTGA AGACGGTCTG CTGCGACGTG
AACAACCGCG GCGTCGCCGT CTACGGCAAC GAAGTGTTCA TGGGCACGCT GGACAATCAC
GTCCTCGCCT TAGATGCGAC GACCGGCAAG GTGCTGTGGA ACGTCGCGCT CGAGAAGCCG
GGCATCGGCT ACTCGATCTC CGAGGCCCCG ATGATCGTCG ACGGCAAGGT GATCATCGGC
TCCGGCGGCG GCGAATACGG CGCCCGCGGC TTCATCGTCG GGCTCGACGC GCAGACCGGC
AAGCTGCTCT GGAAGACCTA CACGATTCCC TCGCCGAGCG AGCCCGGCGG CAAGACCTGG
CCGGCCGGCG CCTACAAGCA CGGCGGCGGC AGCCCGTGGA TGACCGGCAC CTACGATCCG
AAGACCAAGC AGCTCTTCTG GGGTGTGGGC AATCCGGGCC CGTGGCTCGC CTCGATGCGC
CCGGGCAACA ACCTGTATTC GGACAGCGTC ATCGCGATCG ATCCCAATAC CGGCGCCATC
AAGTGGCACT ACCAGTACAC CCGCAACGAC ACCTGGGACT ATGACGGCGT GAACACCGCC
CAGCTCGCCG ACATCACCTA CAAGGGCAAG CCCTACCACG CCCTGGTCGA GGCCAACCGC
AACGGCTATT TCTACGCGAT CAACCGCGAG ACCGGGAAGC TGATCTACGC CGTGCCCTTC
GTGCACGACA CCTCGATCAT CGGGATCAAG GACGGCCAGG CCGTCAACAA CATGAAGCTG
CGCCCCGCGC TCGACAAGCA GATCTTCACC TGCCCGAGCT TCCTCGGCGG CAAGAACTGG
TGGCCCGGCG CGGTCGATCC CGCGACCAAC ATGGCCTATG TGCCGACGCT GCACGCCTGC
ATGACGATGA AGGGCGTTCC GGTCAGCTAC GCCGCGGGCC TGCCCTATCT CGGCGAAACC
TTCGAGATGA AGCCGGACCC CGCCTCGCCG CACCACATGG GCTCGATCCA GGCGATCGAT
CTGTCCACCG GCAAGCAGGT CTGGCAGCAC CGCACGAAGG AGCCGTGGGA CGGCGGCGCG
ATGGCGACCT CCGGCGGCCT CGTCTTCTCC GGCACGGCGG ACGGCCATCT CTACGCCTTC
GACGCCAAGA CCGGAAAGAT CCTGTGGAAG AGCCCCTATC TCGGCTCCGG CATCATCGCC
AACCCGATGT CCTACGAGAT CGACGGCAAG CAGTATGTCG CGGTCTGGTC GGGCTGGGGC
GGCGTGTGGC CGCTGTGGTC GGGCAAGCTC GGCGCCTCGC TCGCCAAGGC GCCGCGCGGC
GGCCAGCTCC ATGTCTTCGC GCTCAATGGC TGA
|
|---|
| Protein sequence | MKSRFARTGT ALIGALAGTL LAAGAASAQP AYPSVTQARL DNAAASKGWL MFNRSYAGDD
YAPFAQINTK NVASLKPAWS SAKIDIPNGF EGTPIVNGDY MFATTPLDHL IAFNAKTGQK
LWEYDYDLPK TALKTVCCDV NNRGVAVYGN EVFMGTLDNH VLALDATTGK VLWNVALEKP
GIGYSISEAP MIVDGKVIIG SGGGEYGARG FIVGLDAQTG KLLWKTYTIP SPSEPGGKTW
PAGAYKHGGG SPWMTGTYDP KTKQLFWGVG NPGPWLASMR PGNNLYSDSV IAIDPNTGAI
KWHYQYTRND TWDYDGVNTA QLADITYKGK PYHALVEANR NGYFYAINRE TGKLIYAVPF
VHDTSIIGIK DGQAVNNMKL RPALDKQIFT CPSFLGGKNW WPGAVDPATN MAYVPTLHAC
MTMKGVPVSY AAGLPYLGET FEMKPDPASP HHMGSIQAID LSTGKQVWQH RTKEPWDGGA
MATSGGLVFS GTADGHLYAF DAKTGKILWK SPYLGSGIIA NPMSYEIDGK QYVAVWSGWG
GVWPLWSGKL GASLAKAPRG GQLHVFALNG
|
|---|
| |