| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1694 |
|---|
| Symbol | rpsB |
|---|
| ID | 5160960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 1874451 |
|---|
| End bp | 1875221 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640553611 |
|---|
| Product | 30S ribosomal protein S2 |
|---|
| Protein accession | YP_001234818 |
|---|
| Protein GI | 148260691 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.559566 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATGC CAGACGTCTC CCTGCGCCAG CTGCTCGAAG CCGGCGTGCA TTTCGGCCAC
AACACCCGCC GCTGGAACCC GCGCATGGCG CCGTTCCTGT TCGGCGTGCG CAACCAGGTC
CACATCATCG ACCTGCAGCA GACCGTGCCG ATGCTCGAGC GCGCGCTGCG CGAGATCCGC
AACGTCACCG CCGGCGGCGG GCGCGTGCTG TTCGTCGGCA CCAAGCGGGC GGCGGCCGAG
CACGTGGCGT ATGCGGCGAA GCGCTGCGGC CAGTATTACG TCAATCACCG CTGGCTCGGC
GGCATGCTGA CCAACTGGAA GACCATCACC AACTCGATCC GCAAGCTGCG GCAGATGGAA
GAGACGCTGG CCGGCGATGG CCAGGGCCTG ACCAAGAAGG AAATGCTGAA CCTCATGCGC
GAGCGCGACA AGCTCGACCG CGCGCTGGGC GGCATCAAGG AAATGGGCGG CCTGCCGGAC
ATCCTGTTCA TCATCGACAC GAACAAGGAG AAGCTCGCGG TCGAGGAAGC CAACAAGCTC
GGCATTCCGG TCGTCGCGGT GCTCGACTCG AACTCGAACC CCGAGGGTGT CACCTATCCG
ATCCCCGGCA ATGACGACGC GATCCGCGCG ATCACGCTGT ATTGCGACCT GGTCGCGAAC
GCGGTGCTCG ACGGGATCAG CGCCGAGATG GCGGCTTCCG GCGCGGATAT CGGCGCGCTG
GAAGAACTGC CGGCCGAGGC GGTGGACGAG GACGCCGAAG CGCACGCCTG A
|
|---|
| Protein sequence | MAMPDVSLRQ LLEAGVHFGH NTRRWNPRMA PFLFGVRNQV HIIDLQQTVP MLERALREIR
NVTAGGGRVL FVGTKRAAAE HVAYAAKRCG QYYVNHRWLG GMLTNWKTIT NSIRKLRQME
ETLAGDGQGL TKKEMLNLMR ERDKLDRALG GIKEMGGLPD ILFIIDTNKE KLAVEEANKL
GIPVVAVLDS NSNPEGVTYP IPGNDDAIRA ITLYCDLVAN AVLDGISAEM AASGADIGAL
EELPAEAVDE DAEAHA
|
|---|
| |