| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1691 |
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| Symbol | |
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| ID | 5160447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 1870519 |
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| End bp | 1872216 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640553608 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001234815 |
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| Protein GI | 148260688 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTGGT CGGAGGAGCT GGAAGAACTC CTGTTCCTCT GGCTTGCCAT GTTCGGCACG
GTCATCGCGC TGCGCCGTGG CGGCCACATG CGCATGACGG CGCTCGTCGC CCGTCTCGGC
CCCTCGACCC GCGCCTTCGC CGAGGCCTTC GCGCTGGCGG CGATGGCCGG CTTCGCGCTG
CTGCTCCTGC CGGACGCGAT CGGCTTCGCC GCCCAGCAGG GCGCGATCCA CACGCCGGCG
CTGGGCCTGC CCGGCAGCCT GCGCACCGCC GCCCTGCCGG CTGGCTTCGG GCTGATCGTG
CTGACCGCGC TGGTCCAGCT CCCGGCGCAC CGCCTGCGCG ACCTGCTGCT CGCCGCGATC
GGCCTCGCCG CCGCCGGCCT CGCGCTGTCC GTCCTCGCCC CCTGGTTCGA CGATATCGGC
AACTGGTCGC TCGTCGTCTT CTTCGTGCTG CTGCTCGGCG CGGGCGTTGC CGCCGGCGTG
CCGATCGGCT TCGCCTTCGG CCTCGCCACC TTCGCCTATC TCGCCGATGC CGGCGGCATT
CCGCTCTCGA TCATGGTCGG CAAGATGCAG GAGGGCATGA GTTCGCTGAT CCTGCTCGCG
GTGCCGCTCT TCGTCTTCCT CGGCACGCTG ATCGAGATGA CCGGCATGGC CCGCGCGATG
GTCGACAGCC TGGCCGCCCT GTTCGGCCAT TTCCGCGGCG GGCTCAGCTA TGTCCTGCTC
GGCGCGATGT ATATCGTCTC CGGCATTTCC GGCGCCAAGG CGGCGGACAT GGCGGCGGTC
GCCCCGGTGC TGTTCCCCGA GATGAAGCGC CGCGGCGTGC CGGAGGGCGA GCTGGTCTCG
CTGCTCGCCG CCTCCGGCGC GATGAGCGAG ACGATCCCGC CCAGCCTGGT GCTGATCATC
ATCGGCTCGG TCACCAGCGT CTCGATCGCC GCCCTCTTCG CCGGCGGCAT GCTGCCGGCG
CTCGTGCTGG CGATCGTGCT CGGCATCATC GCGCGGCGGA ACGCGGGGCG CGATGGCCAC
GGTGCCGCGC CGCGCGCGCC CGTCCGGATC ATGGCGCGGA ATTTCGTCAT CGCCCTGCCG
GCGCTGGTCG TCCCCTTCCT GATCCGCTTC GCCGTCGCCG ACGGCATCGC CACCGCGACC
GAGGTGTCCA CCATCGGCAT TTTCTATTCG GCCCTGGTCG GCCTGCTCGT CTACCGCCAG
TTCGACTGGC GCCGCCTCTG GCCGATGCTG GTGGACAGCG CATCGCTCTC CGGCGCGATC
CTGTTCATCA TCGGCACCGC GAGCTGCATG TCCTGGGCGC TCACCCAGTC CGGCTTCGCG
ATGTCGCTGG GGGCGGCGAT GCAGGCGGTG CCCGGCGGGC GCGACGGCTT CCTGCTCGCG
TCCATCGTGG TCTTCATCGT GCTCGGCAGC GTTCTCGAGG GCATCCCCGC GATGGTGCTG
TTCGGCCCGC TGCTGTTCCC GGTGGCGAGC CAGGCCGGCA TCAACGAGGT GCACTACGCG
ATCGTGGTGA TCCTCGCGAT GGGGATCGGC CTGTTCGCCC CGCCCTTCGG CGTCGGCTAC
TACGCCGCCT GCGCGATCGG GCGGATCGAC CCTGCCGCCG GCATGCGCCG CATCGTGCCC
TATCTTGCCG CGCTGCTGAT CGGCCTGCTG ATCGTCGCCT TCGTCCCGGC GATCACCACG
GTCCTGCTCC CCCACTGA
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| Protein sequence | MVWSEELEEL LFLWLAMFGT VIALRRGGHM RMTALVARLG PSTRAFAEAF ALAAMAGFAL
LLLPDAIGFA AQQGAIHTPA LGLPGSLRTA ALPAGFGLIV LTALVQLPAH RLRDLLLAAI
GLAAAGLALS VLAPWFDDIG NWSLVVFFVL LLGAGVAAGV PIGFAFGLAT FAYLADAGGI
PLSIMVGKMQ EGMSSLILLA VPLFVFLGTL IEMTGMARAM VDSLAALFGH FRGGLSYVLL
GAMYIVSGIS GAKAADMAAV APVLFPEMKR RGVPEGELVS LLAASGAMSE TIPPSLVLII
IGSVTSVSIA ALFAGGMLPA LVLAIVLGII ARRNAGRDGH GAAPRAPVRI MARNFVIALP
ALVVPFLIRF AVADGIATAT EVSTIGIFYS ALVGLLVYRQ FDWRRLWPML VDSASLSGAI
LFIIGTASCM SWALTQSGFA MSLGAAMQAV PGGRDGFLLA SIVVFIVLGS VLEGIPAMVL
FGPLLFPVAS QAGINEVHYA IVVILAMGIG LFAPPFGVGY YAACAIGRID PAAGMRRIVP
YLAALLIGLL IVAFVPAITT VLLPH
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