| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1689 |
|---|
| Symbol | |
|---|
| ID | 5160286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 1868465 |
|---|
| End bp | 1869271 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 640553606 |
|---|
| Product | HpcH/HpaI aldolase |
|---|
| Protein accession | YP_001234813 |
|---|
| Protein GI | 148260686 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.69146 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG GCGGTCTCGC CCTGCTCTTC GTCCCGGCGG ACCGGCCGGA ACGCTTCGCC
AGGGCCGCCG CCTCCGGCGC CGATTCCATC ATCATCGACC TCGAGGACGC GGTCGCCCCC
GCGGCGAAGT CCGCCGCCCG CGCCGCCCTC GCCGCCCCGG GCGCGCTGCC CGGCGGGATC
GAGATCTTCC TGCGGGTGAA CGCCGCCGGC ACGCCCTGGC ACGCGGAGGA TCTCGCCTGC
GCCGCGCGCC TGCCCCTTGC CGGGATCGTG CTGCCCAAGG CGGAAGCGCC GGAGCGGATC
GCCGCGGTTT CGCAAGCCGC CGGCGGCCCT CCGGTCATCG CCCTGATCGA GACCGCGCGC
GGCCTCGCCG AGGCGCGCCG CCTCGCCGCC GCCGGGGTTG CGCGGCTTGC GTTCGGCTCG
ATCGATTTCT GCGCCGATCT CGGCGCCGCG CACACGCGCG AGGCCCTGCT CCACGCCCGC
GCGGAACTCG TGCTCGCCGC CCGCCTCGCC GCCCTGCCGC CGCCGATCGA CGGCGTCACC
ACCGCGATCG ACGATGAAGC CGCGATCGAG GACGACGCCC GCCACGCCGC CAGCCTCGGC
TTCGGCGGCA AGCTCTGCAT CCACCCGCGC CAGATCGCGC CGGCCCGGCA GGGCTTCCGC
CCGTCGGCGG CGGAACTCGC CTGGGCGCAG CGGATTCTCG CCGCCGGGCC CGATGGCGCC
GAGGCGGTCG ACGGCGCCAT GGTCGACGCC CCGGTCCGCG CCCGCGCCCG CCAGATCGCC
CGCCGCGCCG GCATCCCGAC GCCGTGA
|
|---|
| Protein sequence | MSAGGLALLF VPADRPERFA RAAASGADSI IIDLEDAVAP AAKSAARAAL AAPGALPGGI
EIFLRVNAAG TPWHAEDLAC AARLPLAGIV LPKAEAPERI AAVSQAAGGP PVIALIETAR
GLAEARRLAA AGVARLAFGS IDFCADLGAA HTREALLHAR AELVLAARLA ALPPPIDGVT
TAIDDEAAIE DDARHAASLG FGGKLCIHPR QIAPARQGFR PSAAELAWAQ RILAAGPDGA
EAVDGAMVDA PVRARARQIA RRAGIPTP
|
|---|
| |