| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1636 |
|---|
| Symbol | |
|---|
| ID | 5159712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 1806732 |
|---|
| End bp | 1808486 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640553551 |
|---|
| Product | Beta tubulin, autoregulation binding site |
|---|
| Protein accession | YP_001234761 |
|---|
| Protein GI | 148260634 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGACC TGATCCGCCT GCTCCGCCTC TACGCGCCCT ACCGGGTCTG GGTTCTCGCC
GGCATCGGGC TCGGCGTTCT CACCGTGCTG GCGAATTTCG CGCTGCTCGC GCTCTCCGGC
TGGTTCCTCG CCGCCACCGG GGTCGTCGGT GTCGCCGGCT ATGCGGCGCA GAACGCCTTC
AACTTCTTCA CCCCGGCCGC CGGGGTGCGC TTCTTCGCAA CCCTGCGCGT GCTCGCCCGC
TATGCCGGCA GGCTGGTCGA TCACGAGGCG ACGTTCCGCC TGCTCGCCCG GCTGCGCATG
GTCGCCTATG CCGGGCTCGA ACCGCTCGCC CCGGTCGGCC TCGCCGGCGA GCGCGGCGGC
GACCTGCTCT CCCGCCTCGT CGCCGATATC GACCGGCTGG GCGATTTTTT CCTCCGCGTC
GCCTCGCCCT TCATGATCGC GGCGGCGGCG GCGCTGGTCA TGGCGCTCGG CTTCGCCATC
GTCTCGCCCG AGGCCGGGCT TCTGCTCCTG CTCGGGCTGG TCGTCGCCGG GGTCGCGGTG
CCGCTGGCGA GCCTCGGCCT CGGCCGCCGC CCGGCCGGCG CCGCCGTCGC GCTGCAGGCG
ACGATGCGCG CCGATCTCGT CGATTCCGTC CAGGGCATGG CCGAACTGCT CACCTGCAAT
GCGAGCGGGG CGATGGCGGA GCGGGTCGAC GCGGCGAGCG CGGCGCTGCT CGCCGCCCAG
CGCCGTCTCG CCGCGATCGC CGGCTTCGGC GCCGCCGCCG GCCTGCTCGT GGCCGGGCTG
ACGATGCTGG CGATGCTGCC GCTCGGCGGC GCGCTGGCCG ATGCGCACCG GATCGCCGGG
CCGGTCATCG CCCTGCTCGC CCTCGGCGCG ATGGCCGCCT TCGAGGCCGT CGCCCCGCTG
CCGGCGGCGT TCCAGCTCCT CGGCGGCATG GCGGATTCGG CGCGCCGCGT CTTCGACCTG
CTCGACCGCC CGCCGCCCGT CGCCGAGCCC GCCTCCAGCC CGCCCCGCCC GGCCCGGCTC
GATCTCCGGC TCGACGGCGT TTCGCTCCGC TATCCGGGCG CCGCGCATCC GGCGCTCGCC
GGGATCGACC TCGCGATCGC CGAGGGCGAG CACGTCACCA TTCTCGGCCG CAGCGGTGCC
GGCAAGACCT CGCTGTTCAA CCTGCTGCTC CGCTTCGCCC CGCACGAGGC GGGAACGGCC
ACGATCGGCG GCGTCGATCT CGCCGCCATC CGCGGCGACG ACCTGCGCTC GCTGTTCACC
GTGGTCTCGC AGACCACCGC GATCTTCGCC GGCACCCTGC GCGACAACCT CCTCCTCGCC
CGCCCGGATG CGGACGATGC GGCACTCTGG CACGCGCTCG AGACCGCCCG CCTCGCCGAT
TTCGTCCGCG CCCGTCCCGG TGGTCTCGAT TCGCTGGTGG GCGAGGCGGG GGCAAAACTC
TCCGGCGGCG AGGCGCGGCG GCTCTCGCTC GCCCGCGCCG CCCTGCGCGC CACCCCCTTC
CTGCTGCTCG ACGAGCCGAC AGAGGGGCTC GACCCGCTGA CCGAGGCCGA ATTCCGCCGC
GCGCTCGCCG GGCTCGCCGC CCGGCGCACG GTGATCGCCA TCACCCACCG TCTCGACCAC
CTCGCCGATG ACGACCGCGT GGTGATGCTG GCCGAGGGTC GCATCGTCGC CGACGGCCGT
TTCGGCGCGC TCCGCCAGGG CGCCGGGCCT GTGGCGCGCC TGTCACGGCT GCGGGAGATG
TCGCTCCGGT TCTGA
|
|---|
| Protein sequence | MRDLIRLLRL YAPYRVWVLA GIGLGVLTVL ANFALLALSG WFLAATGVVG VAGYAAQNAF
NFFTPAAGVR FFATLRVLAR YAGRLVDHEA TFRLLARLRM VAYAGLEPLA PVGLAGERGG
DLLSRLVADI DRLGDFFLRV ASPFMIAAAA ALVMALGFAI VSPEAGLLLL LGLVVAGVAV
PLASLGLGRR PAGAAVALQA TMRADLVDSV QGMAELLTCN ASGAMAERVD AASAALLAAQ
RRLAAIAGFG AAAGLLVAGL TMLAMLPLGG ALADAHRIAG PVIALLALGA MAAFEAVAPL
PAAFQLLGGM ADSARRVFDL LDRPPPVAEP ASSPPRPARL DLRLDGVSLR YPGAAHPALA
GIDLAIAEGE HVTILGRSGA GKTSLFNLLL RFAPHEAGTA TIGGVDLAAI RGDDLRSLFT
VVSQTTAIFA GTLRDNLLLA RPDADDAALW HALETARLAD FVRARPGGLD SLVGEAGAKL
SGGEARRLSL ARAALRATPF LLLDEPTEGL DPLTEAEFRR ALAGLAARRT VIAITHRLDH
LADDDRVVML AEGRIVADGR FGALRQGAGP VARLSRLREM SLRF
|
|---|
| |