Gene Acry_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1612 
Symbol 
ID5162452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand- 
Start bp1778236 
End bp1779300 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content71% 
IMG OID640553527 
ProductRNA procession exonuclease-like protein 
Protein accessionYP_001234737 
Protein GI148260610 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACT TGGCGAAACC TGCAATCCGC CCCCATCTTC CCGCCATGCC TCCGCATCCC 
GAAACCTGGC TGCACCCTCG CCCCGAAGGG CTCCATTGCG TGCCGGGCGA CTTCTTCATC 
GACCCCACCC GCGCCGTCGA TCGCGCGGTG ATCACCCATG GCCATGCCGA CCATGCCCGG 
CCGGGCCATC GCCATGTGCT GGCCAGCGCC GAGACGCTTG CGATCATGCG GGTGCGGATG 
GGCGAGGCGC GGGCCGGCGC GGCGCAGCAG GCGGCCGCAC CGGGCGAGAT CGTCCGCATC 
AACGGCGTCG GCGTCTCCCT CATCCCCGCC GGCCATGTCC TCGGCTCCTG CCAGGTGGTG 
CTGGACTATG AAGGCAGCCG CGCCGTGGTC TCGGGCGACT ACAAGCGCCG GCGCGATCCC 
ACCTGCGCGC CCTTCGTCCC GGTGAATTGC GACGTGTTCG TGACGGAGGC GACGTTCGGC 
CTGCCGGTCT TCCGCCATCC GGACGCCGCG GCGGAAATCG CGAAACTGCT CCACTCCATG 
ACGATCTTCC CCACCCGCGC CCATCTCGTC GGCGCCTACG GTCTCGGCAA GGCGCAGCGG 
CTGATCGCCC TGCTGCGCGA AGCCGGATAC GACGCTCCGA TCTACCTCCA CGGCGCCCTG 
CAAAAACTCT GCGACCTCTA CGAAACCCTC GGCGTGCCCC TGGGCGATCT CCGCCCCGCC 
ACGGTCGCCG ACAAGGACGC GCTGAAAGGC GCCATCGTCC TCGCCCCGCC CTCCGCGGTG 
GCGGATCGCT GGGCGCGGCG GCTGGATGAT CCGGTGGTCG CCGTCGCCTC GGGCTGGATG 
CGGGTGCGCC AGCGCGCCAA GGCCTCCGGC GTCGAACTGC CGCTCGTCAT CTCCGACCAT 
GCCGACTGGG GCGAACTGCT CGCCACGGTG GAGGATGTCG CCGCCCCGGA AATCTGGGTC 
ACCCACGGCG CCGAGGCGGC CCTGCTGCGC CAGCTCTCGC TGATGGGCCG GCGCGGCCGC 
GCGCTCAGCC TGATCGGCTA TGGCGACGAG GCGGAGCAGG AATGA
 
Protein sequence
MADLAKPAIR PHLPAMPPHP ETWLHPRPEG LHCVPGDFFI DPTRAVDRAV ITHGHADHAR 
PGHRHVLASA ETLAIMRVRM GEARAGAAQQ AAAPGEIVRI NGVGVSLIPA GHVLGSCQVV 
LDYEGSRAVV SGDYKRRRDP TCAPFVPVNC DVFVTEATFG LPVFRHPDAA AEIAKLLHSM 
TIFPTRAHLV GAYGLGKAQR LIALLREAGY DAPIYLHGAL QKLCDLYETL GVPLGDLRPA 
TVADKDALKG AIVLAPPSAV ADRWARRLDD PVVAVASGWM RVRQRAKASG VELPLVISDH 
ADWGELLATV EDVAAPEIWV THGAEAALLR QLSLMGRRGR ALSLIGYGDE AEQE