Gene Acry_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1602 
Symbol 
ID5162145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp1769365 
End bp1770414 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content70% 
IMG OID640553517 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001234727 
Protein GI148260600 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.195048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGAGC GACTGCGGGG CCGGGAACCG GCGCCAGACA CGTCCGGCAT CGGTCCGGCA 
TCGCCAGCTC CGAGCCTGGC GCGGCGGGGG ATCGACATCC TGCTCCTGCC CTGGGTGAGC
GTGCTGATCG CGCTGGTCGC GATTTCGGCG CTGCTGAGTT TGGCGACGCC GTATTTCTTC
ACCGAAGACA ACATCATCGG CACCGTCGCG GTCTATTTCT CGTGGATCTG CATCGCCGGG
TTCGGCGAGG CGCTGGTGAT GATCGGCGGC GGGCTCGACC TTTCGGTGGG CTCGACCATG
GGGCTGGCCG GCATGATCTC GGCCATGGTG CTGGCGGCGG GCGGCAACCT TGCGCTGGCG
CTGCTGGCGG GGCTCGCGAC CGGGGCGGCG GTGGGGCTGG CCAACGGGCT GGTGATCACC
CGCATCGGGC TCAACCCGTT CATCACCACG CTCGGCTCGC TCAGCGTGGT GCGGGGGCTG
GCCTTCGGGA TCGGCCAGGG GATGGCGGTG ACGGCGCCGA GCGATGCGGC GGGCAACGCC
TTCTCGGCGC TCGGCACCGG CACGGCGCTC GGCATTCCGG TGCCGGTGCT GGTGATGCTC
GGCTTCGGCG TGATCGTCCA TGTCGTGCTG ACCGGCACGC CGTTCGGCCG GCATGTCTAC
GGGCTTGGCG GCAACGAGCA GGCCTCGCGC CTGCTGGGGC TGAACGTCGA CCGGCTGAAG
ATCCGGCTCT ACGTGATTTC CGGCGTGCTC GCCGCGATCG GCGGGATGCT GCTGACCGCG
AAATCGGGCA CGGCGCTGCC GGATGCCGCC ACCGGCTACG AACTCAAGGT GATCGCCGCG
GTGATCATCG GCGGCACCAG CCTCGCCGGC GGGCGGGGCA CGATTCCGGG CGTGCTGATC
GGTGCGGCGC TGCTCGGCGT GATCAATGAC GGCATCGTCC TGCTCGGGCT GGCCGGCTAC
TGGCAGCAGC TGATCACCGG GCTCGTGATC GTCGCCGCCG CGGCGATCGA CATCCTGCGC
AGGAGGCTCG AACGCGTGCG CATCGCCTGA
 
Protein sequence
MGERLRGREP APDTSGIGPA SPAPSLARRG IDILLLPWVS VLIALVAISA LLSLATPYFF 
TEDNIIGTVA VYFSWICIAG FGEALVMIGG GLDLSVGSTM GLAGMISAMV LAAGGNLALA
LLAGLATGAA VGLANGLVIT RIGLNPFITT LGSLSVVRGL AFGIGQGMAV TAPSDAAGNA
FSALGTGTAL GIPVPVLVML GFGVIVHVVL TGTPFGRHVY GLGGNEQASR LLGLNVDRLK
IRLYVISGVL AAIGGMLLTA KSGTALPDAA TGYELKVIAA VIIGGTSLAG GRGTIPGVLI
GAALLGVIND GIVLLGLAGY WQQLITGLVI VAAAAIDILR RRLERVRIA