Gene Acry_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1601 
Symbol 
ID5162144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand- 
Start bp1768299 
End bp1769336 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content66% 
IMG OID640553516 
ProductABC-type sugar transport system periplasmic component-like protein 
Protein accessionYP_001234726 
Protein GI148260599 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.101113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGAA ACACGCTCAT CCGCGCCGGG CGGCGCGACA TTCTCAAACT CGCCGGCGCG 
GGGGCGGCGG CGGGGCTCGC GATGCCCGCG ATCGCCCGCG CGAACAAGCG CTACACGATC 
GCGGTGGTGC CGAAATCGCT CGACAATCCG GTGTTCTACA CGGCGCATTA CGGGGCGATG 
CAGCGGGCGA AGGAGCTTGG CGATGTCGAC CTGATCTGGA CCGCCTCGGC CTCGTCGGAT 
GCGAGCCAGG AAGCGGAGAT CGTGCAGAAC CTGATCACGC GGCATGTCGA TGGCATGGCG 
ATCGACGCCA ACGCGCCGCA GCCGCTGATC GCCCCGGTCA ACGAGGCGGT GGAGAAGGGC 
ATCGTCACCA TCACCTGGGA TTCGGACGTG CCGGGCAGCA AGCGGCAGGT CTATTACGGG 
GTGGACAATA CCAAGATGGG CGTCTCGATG GGCGAGCAGG CGCTGAAATT CATGGGCACC 
AAGGGCAAGG TGATCCTGAT TTCCGGCGGG CCGGGGGCGA CCAACCTGAA CGCGCGGCTG 
GCCGGCGTGA AGCAGGTGAT GGGCAAGCAC AAGGGGATCG AGTTCCTCGG CCCGTATTTC 
GACAATGACG ACCTGACCAA GGCGCAGGAG CTGATCGACA ACGTGCTGAC CGCGCATCCC 
GACGCGGGCG CGATCGTCGA TGTCGCGGCG GTGGCGTTCT TCGGCAAGCT CTCGGCCATG 
CCCAAGCTGA TCGCCAACCG CGGCAAGGTG AAGATCATCG GCTCGGACGT GCTGGCGCCG 
GAGATTCCGC TGGTCGAGAA GGGCTACGTG CAGGCGCTGG TCGGCCAGGA TTACTGGGGC 
TGGGGGTATC AGACCGTCAC CATCATCCAC AACATGCTGA CCAACAAGAA GTGCCATTAT 
CCGACGCTGG TGCCGCAGGC GATGCCGGTG GTGACGAAGG CGAACGCGGC GCACTGGGTG 
AAGCTGTGGG ACGAGGCGAA GACGCCGGCC GGGGCGGCGA AGGCGTTCCG GGAGGCGCCG 
ATCGGCTGCA TGGGCTGA
 
Protein sequence
MTRNTLIRAG RRDILKLAGA GAAAGLAMPA IARANKRYTI AVVPKSLDNP VFYTAHYGAM 
QRAKELGDVD LIWTASASSD ASQEAEIVQN LITRHVDGMA IDANAPQPLI APVNEAVEKG 
IVTITWDSDV PGSKRQVYYG VDNTKMGVSM GEQALKFMGT KGKVILISGG PGATNLNARL 
AGVKQVMGKH KGIEFLGPYF DNDDLTKAQE LIDNVLTAHP DAGAIVDVAA VAFFGKLSAM 
PKLIANRGKV KIIGSDVLAP EIPLVEKGYV QALVGQDYWG WGYQTVTIIH NMLTNKKCHY 
PTLVPQAMPV VTKANAAHWV KLWDEAKTPA GAAKAFREAP IGCMG