| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1582 |
|---|
| Symbol | |
|---|
| ID | 5161716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 1747786 |
|---|
| End bp | 1749312 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640553497 |
|---|
| Product | nitrate reductase, beta subunit |
|---|
| Protein accession | YP_001234707 |
|---|
| Protein GI | 148260580 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1140] Nitrate reductase beta subunit |
|---|
| TIGRFAM ID | [TIGR01660] nitrate reductase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000310576 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC GCGCCCAGGT GGCGATGGTG CTCAACCTCG ACAAGTGCAT CGGCTGCCAC
ACCTGCTCCG TCACCTGCAA GAATGTCTGG ACCTCGCGCG AGGGCGTCGA ATACGCCTGG
TTCAACAATG TCGAAACCAA GCCCGGCGTC GGCTTCCCGC GCGAATGGGA AAACCAGAAA
CGCTGGAACG GCGGCTGGCG CCGCCTGGCG GACGGCACGA TCCAGCCGCG CATCGGCGCG
AAATGGCGCG TGCTGGCCAA CATCTTCGCC AACCCCGACC TGCCCGAGAT CGACGACTAC
TACGAGCCCT TCACCTTCGA TTACGAGCAT CTCTATTCCG CCCCCGAAAT GGAGGCGACG
CCCACGGCGA AGCCCCGCTC GCTGATCAGC GGCGCGCCGA TCGAGAAGAT CGTGCGCGGC
CCGAACTGGG AGGAGATCCT CGGCGGCGAG TTCGAGAAGC GCAGCGCCGA CTACAACTTC
GAAGGCATCC AGAAGGAAAT CTACGGCAAG TTCGAGAACA CCTTCATGAT GTACCTGCCG
CGCCTGTGCG AGCACTGCCT CAATCCGGCC TGCGTCGCCG CCTGTCCCTC GGGGGCGATC
TACAAGCGCG ACGAGGACGG CATCGTGCTG ATCGACCAGG ACAAGTGCCG CGGCTGGCGC
ATGTGCGTCT CCGGCTGCCC CTACAAGAAA ATCTACTACA ACTGGAAGTC CGGCAAATCC
GAGAAGTGCA TCTTCTGCTA CCCGCGCATC GAGGCCGGCG AGCCCACGGT CTGCTCGGAA
ACCTGCGTCG GCCGCATCCG CAATCTCGGC GTCGTGCTCT ACGACGCCGA CCGGATCGAG
GCCGCCGCCA GCGCGCCCGA CGAGAAGGAC CTTTATGAAA GCCAGCTCTC GATCTTCCTC
GACCCGAACG ACCCGGAGGT GATCCGCCAG GCCCGCGCCG ACGGCGTGCC GGAAAACTGG
CTCGTCGCCG CCCGCCGCTC GCCGGTGTGG AAACTGGCGA TGGAATGGAA GATCGCCTTC
CCCCTGCATC CCGAATACCG CACCCTGCCG ATGGTCTGGT ACGTCCCGCC GCTCTCGCCC
ATCACCGCCG CGGCGAATGC CGGCGCGATC GCCGAGCGCG ACGGCATGCC CGACATCCGC
AGCCTGCGAA TTCCGCTGCG CTACCTTGCC AATCTGCTGA CCGCCGGCGA CGAGGCGCCG
GTCGCCCAGG CGCTGGAGCG CATGCTCGCC ATGCGCGCCT ACATGCGCGC GAAGACGGTC
GACGGCGTGA TCGACGAAAG CATCGCCGCC CGCGTCGGCC TCACCGCCGC CGAGATCGAG
GCGATGTACC AGCTGATGGC GATCGCGAAC TACGAAGACC GCTTCGTCAT CCCCTCGACG
CATCGCGAAG CCGGCGAGAA CGCGTTCGAC CTGCGCGGCG GCTGCGGCTT CAGCTTCGGC
AACGGCTGCT CCGGCGGCGC CGCGAAACCC AGCCTGTTCG GCTCGCCGAG CCATCGCCCG
GTGCCGATCG CGCCGGAAAA CGCCTGA
|
|---|
| Protein sequence | MKIRAQVAMV LNLDKCIGCH TCSVTCKNVW TSREGVEYAW FNNVETKPGV GFPREWENQK
RWNGGWRRLA DGTIQPRIGA KWRVLANIFA NPDLPEIDDY YEPFTFDYEH LYSAPEMEAT
PTAKPRSLIS GAPIEKIVRG PNWEEILGGE FEKRSADYNF EGIQKEIYGK FENTFMMYLP
RLCEHCLNPA CVAACPSGAI YKRDEDGIVL IDQDKCRGWR MCVSGCPYKK IYYNWKSGKS
EKCIFCYPRI EAGEPTVCSE TCVGRIRNLG VVLYDADRIE AAASAPDEKD LYESQLSIFL
DPNDPEVIRQ ARADGVPENW LVAARRSPVW KLAMEWKIAF PLHPEYRTLP MVWYVPPLSP
ITAAANAGAI AERDGMPDIR SLRIPLRYLA NLLTAGDEAP VAQALERMLA MRAYMRAKTV
DGVIDESIAA RVGLTAAEIE AMYQLMAIAN YEDRFVIPST HREAGENAFD LRGGCGFSFG
NGCSGGAAKP SLFGSPSHRP VPIAPENA
|
|---|
| |