| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1552 |
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| Symbol | |
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| ID | 5161830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 1711945 |
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| End bp | 1714788 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640553466 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001234677 |
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| Protein GI | 148260550 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCA CCGTGCCCGA CGATGTGACG ACGCTCGGCG CGCTGGTCCT GGGGGGGCGC
GGCGTGGTGC TCTGGGATCT CGATCCGGTG GCGGGCCTGA TCCGGCATTA CCACGGGCAG
GCGCGGGAAG GGGTGGATTG CCCGCCGGCG GAGACGGTCG AGCAGGTCTG CGCGCGGGTC
CATCCCGACG ACCGGGCGCG GGTCGGCGCG GCGCTGCGCT GCGACGACGG GCAGGCGGCA
CCGGAGTTCG AGATCGGCTA TCGCGCGCGG GATGCGGCCG GCGGCTGGAT CCGGCAGGTC
GCGCGCGGCC GGGTGGTGGT GCGCGACGCC GCGGGCCGGC CGCTGCGGGT GGTGGGCATC
ACCATCGATC TCGACCTGGT CCCCGACCTG CCCGCCACGC CTTGCGGGGG CGGCGATTCC
GAGCGTCTCG CCGCGCTGGC GCTCGAACTT GCGCAGCGCA CCGAGGAACT CGCCAGCGCG
CATCGCCTCG CCCGCGTCGG CGCCTGGCGG TGGGACCTGG CACGGCGCCG GATCTGGCTC
TCGGTGGAAA CGACGTGGCT GCTCGGCCTT GAAGGCGGCG CCGCCGAGAT CGATTACGAC
CAGATGCGCC GCGCCATCCA CCCGGACGAT TACGACGCCG CGATGGCGAC CTTCCGGGAG
GCCGCGCGGA GCGGGACGGC GGCGACGCTG GAATACCGGG TGATCCTGCC GGACGGGGCG
GTGCATGACG TGCTGACCCA TGCCGAGCCG GTGGTGGGGG CGGATGGAAC CGTGTCGCAG
CTGCGCGGCA CCACCCAGGA CATCACGCCC TATCGCCGGA TCGAGGCGGC GCTGCGCGAG
AGCGAGGACC ATTACCGGCA CATGGTCGAG CTGCACCCGC AGATTCCATG GACGGCCGGC
CCCGACGGCG CGATTCTCGA GGTCGGCCCG CAATGGTTCG CGCTGACCGG CATGAGCCGG
GACGAGACCA TGCCGTTCGG CTGGGTTTCG GCGCTGCATC CGGACGACCG GGACCCGACG
CTCGCCGCCT GGCGGCGGAA CATCGAGTCC GGCGCGCCGA TCGACGTCGA ATACCGGCTC
CGGCTGTCCG ACGGCGCCTA TGGCTGGATG CGCGCCCGCG CCGCCGCCCG GCGTGGCGAG
GACGGGCGGA TCCTGCGCTG GTACGGCACG CTGGAGGACA TCACCGATCG CCATGCGGCG
GAGGAGGCGC GGAAGGCGTC CGAGGCGCTG GCCCTGCGCG TGCTGGAGGC GAGCGGCGAT
GCCGTGATCG TTTTCGATGC CGCCGGGCGC GCGAGGTTCG CCAATGCGCG GGCCATGACC
ATGCTCGGCC TGCCGGACGA TGCGGTGGGA TGCAACGTCG CCAGCCTGTT CGCCGAAGCC
CATTGCCGCG AGCTGCGCAT GGCCGTTTCG CGGGCGATGC GGGACGGCGC CGGCGGGCAT
TTCGAGCTGT TCTGGCCGCC GACCGATCTC TGGCTGGAGG CGAGCCTGTT CGCCGATGGC
GGCGACATTT CGCTGTTCCT GCGCGACATT TCGGAAAAGC GCCTCGCGCA GCAGCAGCTT
CGCTACGCGG CGAGCTTCGA CTTCATGACC GGCGCGGCGA ATCGCGGCAC CCTGTTTTCG
CGGCTGTCCG CGCAGCTGGA GCGGCAGGAC GCCGGCGACC TGACGGCGCT GCTGTGCCTC
GATCTCGACT ATTTCAAGGA GATCAACGAC CAGCACGGGC ATCCCGCGGG CGATGCTGTG
CTGCGCCAGT TCGTCAGCCG GCTGCGGCTC TGCCTGCGTT CGCAGGACCT GCTCGCGCGC
TGCGGCGGCG ACGAGTTCGT GGTCATGCAG ACCGGGGTGG GCGGGCCGGC CGACGCCATC
GCGCTCGCCG AGCGCATTCT TGCGATCATG CGGGCGCCGT TCGATGTGGA TGGCATCTCG
CTGCCGAGCA GCGTGTCGGT CGGCATCGCC GTGTCGAGCC TGGGGATGAC CGATGCCGAT
GCGCTCTACA ACCAGGCGGA TCGGGCGCTC TACGTCGCGA AGTCGAAGGC GCGCGGCTCC
TATCGCCTGT TCCATCCGGA CATGCAGCGG GCGGACGAGG CCGGGCGGCG GCTGCGCGCG
GAGCTGTCCG GCGCGCTCAC GCGGGGCGAG TTCGCGCTCG CCTTCCAGCC CATCGTGCAG
CTGGCGAGCC AGCGCATCGT CGGCGTCGAG GCGCTGCTGC GCTGGCACCA TCCCGAGCGC
GGCCTGATTC TGCCGGCGGA GTTCATTCCG GTCGCGGAGG AAAGCGGCCA GATCGCCTCC
CTCGGCGCGT GGGTTCTCGG CACCGCCTGC AAGGCCGCCC GCCACTGGCC GGAGGACGTG
AAGATTTCCG TCAATGTTTC GCCGCGCCAG TTCGAGCTGG GCGATATCCG GCTGGTCGTC
GGCGACGCGC TGGCCGCGGC CGGACTGCCC GCCTCGCGGC TCAAGCTCGA AGTGACCGAA
TCGGTCCTGC TGTCGCAGAA CGCATCGAGC ATTCACGTCC TGCAGGATCT CCGCGAGCAG
GGCGTGATTC TCGTGCTCGA CGATTTCGGA ACGGGCTATT CGTCGCTGTC GTATCTCGAC
ACGTTCAAGG TCGATATCGT CAAGGTCGAC AAGTCCTTCA TCTCGCGCAT CCGCGCGCCG
GGCGACCGGC AGCCGATCTT CGAGGCGATC ATGGGCATGA CGGCGGCGCT CAACCTGCCG
GTGACGGCGG AAGGGGTCGA AACCAGGGTC CAGCTCGATT ACGTGACGCG GCTCGGCTGC
GAGTGGGCGC AGGGCTATTA CTTCGCCCGC CCGGTGTCGG AATACGAATT GCGCCGGCGC
CTGCAGGGAT TCTCCCGCGC CTGA
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| Protein sequence | MSRTVPDDVT TLGALVLGGR GVVLWDLDPV AGLIRHYHGQ AREGVDCPPA ETVEQVCARV
HPDDRARVGA ALRCDDGQAA PEFEIGYRAR DAAGGWIRQV ARGRVVVRDA AGRPLRVVGI
TIDLDLVPDL PATPCGGGDS ERLAALALEL AQRTEELASA HRLARVGAWR WDLARRRIWL
SVETTWLLGL EGGAAEIDYD QMRRAIHPDD YDAAMATFRE AARSGTAATL EYRVILPDGA
VHDVLTHAEP VVGADGTVSQ LRGTTQDITP YRRIEAALRE SEDHYRHMVE LHPQIPWTAG
PDGAILEVGP QWFALTGMSR DETMPFGWVS ALHPDDRDPT LAAWRRNIES GAPIDVEYRL
RLSDGAYGWM RARAAARRGE DGRILRWYGT LEDITDRHAA EEARKASEAL ALRVLEASGD
AVIVFDAAGR ARFANARAMT MLGLPDDAVG CNVASLFAEA HCRELRMAVS RAMRDGAGGH
FELFWPPTDL WLEASLFADG GDISLFLRDI SEKRLAQQQL RYAASFDFMT GAANRGTLFS
RLSAQLERQD AGDLTALLCL DLDYFKEIND QHGHPAGDAV LRQFVSRLRL CLRSQDLLAR
CGGDEFVVMQ TGVGGPADAI ALAERILAIM RAPFDVDGIS LPSSVSVGIA VSSLGMTDAD
ALYNQADRAL YVAKSKARGS YRLFHPDMQR ADEAGRRLRA ELSGALTRGE FALAFQPIVQ
LASQRIVGVE ALLRWHHPER GLILPAEFIP VAEESGQIAS LGAWVLGTAC KAARHWPEDV
KISVNVSPRQ FELGDIRLVV GDALAAAGLP ASRLKLEVTE SVLLSQNASS IHVLQDLREQ
GVILVLDDFG TGYSSLSYLD TFKVDIVKVD KSFISRIRAP GDRQPIFEAI MGMTAALNLP
VTAEGVETRV QLDYVTRLGC EWAQGYYFAR PVSEYELRRR LQGFSRA
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