Gene Acry_1512 details

Gene Information

• Locus tag: Acry_1512
• Symbol: rpsF
• ID: 5160277
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: -
• Start bp: 1673103
• End bp: 1673579
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640553427
• Product: 30S ribosomal protein S6
• Protein accession: YP_001234639
• Protein GI: 148260512
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0360] Ribosomal protein S6
• TIGRFAM ID: [TIGR00166] ribosomal protein S6

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.589185
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCTAT ACGAATGCGT GCTGATCGCG CGCAGTGAAA TCACGCAGCA GCAGGTCGAC 
ACCATCGCCG ACGCGGTGAC CGCCCAGGTC GAGAGCGAAA GCGGCGCGGT GAAGAAGCGC 
GAATACTGGG GCCTGCGCAA TCTCGCCTAC CGCATCAAGA AGAACCGCAA GGGACATTAT 
GTCCTGCTCG GGCTCGATGC CGAACCGGCG ACGATCAGCG AGATGGAGCG CCAGCTCGGC 
CTGAACGAGG ACGTGTTGCG CTTCATGACC GTGCGCGTCG AGGACATCGA CGAGGCGCCG 
TCCGCGCCGC TCGCGCGCCG CGGCGAGGAC CGTGATCGCG ATCGCGGGTT CCGCGGGCCG 
AAGCCCGCCG GCCGCTTCGA TTCGGGCCGC CGGCGCGGCG CCGATGATCG CGAGGAATAC 
CGGGCGCGCG ACGAGTATCG TTCGGACCGC GACGAAGATC AGAACGAGGA GAACTGA 

 

Protein sequence

MPLYECVLIA RSEITQQQVD TIADAVTAQV ESESGAVKKR EYWGLRNLAY RIKKNRKGHY 
VLLGLDAEPA TISEMERQLG LNEDVLRFMT VRVEDIDEAP SAPLARRGED RDRDRGFRGP 
KPAGRFDSGR RRGADDREEY RARDEYRSDR DEDQNEEN