Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_1487 |
Symbol | |
ID | 5159635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 1649474 |
End bp | 1651864 |
Gene Length | 2391 bp |
Protein Length | 796 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640553400 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001234614 |
Protein GI | 148260487 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCG ATGCCCCTTT CAGAGGAGAG ATGTTCCGCG CCCTGTCGCT CGCCCTGCCG ATCCTGGCAT TGCTCTTGGG AGCCATCCCG GCCGCGAGCG CGGCTGCGCC CGCCTCCAAG GCCACCGCAG CCGCGACATC GCCCGCCGTA AAGGCCGCTC CGCCCCTCAC CGCCACACAG ATCGACACTG CGATCGCGAC GCTGCGCGAC GCGAAGCAGC GCGCCACCCT TATCGCCACG CTCGAAGCCA TGAAAGGAGG GGCGACAGCG GCCACGACGC AACAAGCCGC GCCAGGTATT GGCCTCGGCA TCGCGCAGAC GATCGAGGAA TGGGCGGAAC AGACGCTTCA GGGGATCGGG CGAGCCCTCA GCGACGCGAC CGACATTTCC CTGATCTGGC ATTGGATTGA GTTCGTCGCG ACGGATGCGT GGCTGCGGCA CACGGTATTG CAGGCGACCT GGCGGCTGGC CGTCGTACTG GTGGCGGCTC TCTGCGCCGA ATGGGTGGTC CGCAGGGCAT TGCGTCAACC TCGTACGAGC CTGTTGCGAA ACGCGGCGCG ACGGCGAGCC GCAGATGGAC CGGGGCAAGA GGCCGACGGG GCCGAGGGAA TTGCGGCTGC CGAGGCAGGA GAGACCGAGC GCTCACGCCG CCGCCAGCCG CTGCGACGCT GGTTGCGCCG CGTCCCGTGG GCCCTGGGCC ATTTCGCCCT CGAACTCGTG CCGGTCATTG CCTTCGCACT GGCAGGTGTC GCTTTGGTAT CGGGCGGCAT CGCGGATGAC AGGGTCTCAC GTCTTGTGAT CGGCGCCGCG CTGGAAGCCT ATGTCGTTTC GCGGTTCGCG ATGGAATGCG CCCGTCTCCT GCTCAACCCA AGGGCGCCGG AAATTCGGCT GGCAGGCCTT GGCGATGACC GGGCACGCTG GCTCACCACC TGGCTGCGAG CCATTGTTGG CACAGTCGCC TTCGGATACG CGGCAATTGC GACGGGCGGC CTGTTCGGCC TCTATCCGGC AGCCAGCCGC GTGCTGGTCA AGATCGTTTC GCTGGCGGTG CATCTGATGC TTGCGGTCAT GATCCTGCAG GCGCGGCGGC CGGTGGCGGC CTTCATCCGG GGGGAGACGC CGTCGGCCGG CTTCACGGGC GCGCTCAGGG TCGGACTCGC GCATACCTGG CACATTCTCG CTCTCTTTTA CGTGATCGCC CTATGGGTCG CATGGGCGAT CGGGGTACCG CACGCCTTCT TCATCATGCT GCGGATCGTC GTGGTCCTCG GCCTCGTCGC CATTATCGGA CGCGGAGTCG CGGCCAGCCT GGCGTCGGGG CTCGATTCGC TGTTCGACGA GCGAGGCACG CTACGTTCTC GGCATCCCGA CCTCCACGCG CGGATGCGGA CCTATCTCCC GGTCCTGAAA CTCTCGACAG GCTGCGTGAT CGCCGCGCTC GGCCTTCTGG TCACGCTGCA GCTTTGGGGA GTCAGCGTGT TTGCCTGGTT CGCCGGAACC ACGCTCGGGC GCCAGATCGC CTCGGCAGTC GTGACCATTG CGGCAGCCAT CCTCATCGCC CTCATCGTCT GGGAGGCAGC AAACGCCGCG TTGGAAGCTC ACGCCGAGCG TCTGATACGT CAGGGGCGTC CCGGCCGCGC CGCCCGCTAT CGCACCCTTC TCCCGATGCT CCGATCGGTC CTCATGGGAG CCATTCTGGT TGTGGTCGCG CTGGTGGTGC TCGGCGCCGT GGGCGTCAAC ATCACGCTTC TGCTCGGCGG GCTGTCGATC TTCGGGCTCG CCGTCGGCTT CGGCTCGCAA AAGCTGGTGC AGGACATCAT CACCGGACTT TTCCTGCTCC TGGAAGATGC CGTGCAGGTC GGAGACTGGG TAACCCTCGC CGGAATTTCC GGCAGCGTCG AGAAACTCTC GATCCGCACC ATCCGGCTGC GCGCCGGCGA CGGTTCGCTG AACGTGATCC CGTTCAGCGC GGTGAGCACG GTATCAAATT TCTCACGGGA GTTTTCATTT GCGCCGATCA CGGTCGGCGT TGCCTACAAG GAGGATATCG ACCGCGTCTT CGCCGTGATC CGGGATGAGT TCACGAAAAT GCGCGCGGAC CCGGAATGGG CGCCGAATAT TCTCGGCGAT ATCGAACTTT GGGGCCTCGA CCAGTTCGGT GCCTCCTCGC TCGATATCGT GGGCCGCATG CGCACCCCGG CCGGACAGCA GCATGCGGTA CGCCGCGAAT TCAACCGCCG CCTCAAAATC CGGTTCGACA CCGAGGGCAT CGAGATACCC TTCCCCTATC AGCGGCTGAC CATCGATCCG GAAGAATTCC GCGCCGCGTT TGGCTCCGGC ACTTCAGGTG AGGCACGCCG GCCGCACGAG ACCACGCCGG AGAATGGCTG A
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Protein sequence | MKRDAPFRGE MFRALSLALP ILALLLGAIP AASAAAPASK ATAAATSPAV KAAPPLTATQ IDTAIATLRD AKQRATLIAT LEAMKGGATA ATTQQAAPGI GLGIAQTIEE WAEQTLQGIG RALSDATDIS LIWHWIEFVA TDAWLRHTVL QATWRLAVVL VAALCAEWVV RRALRQPRTS LLRNAARRRA ADGPGQEADG AEGIAAAEAG ETERSRRRQP LRRWLRRVPW ALGHFALELV PVIAFALAGV ALVSGGIADD RVSRLVIGAA LEAYVVSRFA MECARLLLNP RAPEIRLAGL GDDRARWLTT WLRAIVGTVA FGYAAIATGG LFGLYPAASR VLVKIVSLAV HLMLAVMILQ ARRPVAAFIR GETPSAGFTG ALRVGLAHTW HILALFYVIA LWVAWAIGVP HAFFIMLRIV VVLGLVAIIG RGVAASLASG LDSLFDERGT LRSRHPDLHA RMRTYLPVLK LSTGCVIAAL GLLVTLQLWG VSVFAWFAGT TLGRQIASAV VTIAAAILIA LIVWEAANAA LEAHAERLIR QGRPGRAARY RTLLPMLRSV LMGAILVVVA LVVLGAVGVN ITLLLGGLSI FGLAVGFGSQ KLVQDIITGL FLLLEDAVQV GDWVTLAGIS GSVEKLSIRT IRLRAGDGSL NVIPFSAVST VSNFSREFSF APITVGVAYK EDIDRVFAVI RDEFTKMRAD PEWAPNILGD IELWGLDQFG ASSLDIVGRM RTPAGQQHAV RREFNRRLKI RFDTEGIEIP FPYQRLTIDP EEFRAAFGSG TSGEARRPHE TTPENG
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