Gene Acry_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1487 
Symbol 
ID5159635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp1649474 
End bp1651864 
Gene Length2391 bp 
Protein Length796 aa 
Translation table11 
GC content66% 
IMG OID640553400 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_001234614 
Protein GI148260487 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCG ATGCCCCTTT CAGAGGAGAG ATGTTCCGCG CCCTGTCGCT CGCCCTGCCG 
ATCCTGGCAT TGCTCTTGGG AGCCATCCCG GCCGCGAGCG CGGCTGCGCC CGCCTCCAAG
GCCACCGCAG CCGCGACATC GCCCGCCGTA AAGGCCGCTC CGCCCCTCAC CGCCACACAG
ATCGACACTG CGATCGCGAC GCTGCGCGAC GCGAAGCAGC GCGCCACCCT TATCGCCACG
CTCGAAGCCA TGAAAGGAGG GGCGACAGCG GCCACGACGC AACAAGCCGC GCCAGGTATT
GGCCTCGGCA TCGCGCAGAC GATCGAGGAA TGGGCGGAAC AGACGCTTCA GGGGATCGGG
CGAGCCCTCA GCGACGCGAC CGACATTTCC CTGATCTGGC ATTGGATTGA GTTCGTCGCG
ACGGATGCGT GGCTGCGGCA CACGGTATTG CAGGCGACCT GGCGGCTGGC CGTCGTACTG
GTGGCGGCTC TCTGCGCCGA ATGGGTGGTC CGCAGGGCAT TGCGTCAACC TCGTACGAGC
CTGTTGCGAA ACGCGGCGCG ACGGCGAGCC GCAGATGGAC CGGGGCAAGA GGCCGACGGG
GCCGAGGGAA TTGCGGCTGC CGAGGCAGGA GAGACCGAGC GCTCACGCCG CCGCCAGCCG
CTGCGACGCT GGTTGCGCCG CGTCCCGTGG GCCCTGGGCC ATTTCGCCCT CGAACTCGTG
CCGGTCATTG CCTTCGCACT GGCAGGTGTC GCTTTGGTAT CGGGCGGCAT CGCGGATGAC
AGGGTCTCAC GTCTTGTGAT CGGCGCCGCG CTGGAAGCCT ATGTCGTTTC GCGGTTCGCG
ATGGAATGCG CCCGTCTCCT GCTCAACCCA AGGGCGCCGG AAATTCGGCT GGCAGGCCTT
GGCGATGACC GGGCACGCTG GCTCACCACC TGGCTGCGAG CCATTGTTGG CACAGTCGCC
TTCGGATACG CGGCAATTGC GACGGGCGGC CTGTTCGGCC TCTATCCGGC AGCCAGCCGC
GTGCTGGTCA AGATCGTTTC GCTGGCGGTG CATCTGATGC TTGCGGTCAT GATCCTGCAG
GCGCGGCGGC CGGTGGCGGC CTTCATCCGG GGGGAGACGC CGTCGGCCGG CTTCACGGGC
GCGCTCAGGG TCGGACTCGC GCATACCTGG CACATTCTCG CTCTCTTTTA CGTGATCGCC
CTATGGGTCG CATGGGCGAT CGGGGTACCG CACGCCTTCT TCATCATGCT GCGGATCGTC
GTGGTCCTCG GCCTCGTCGC CATTATCGGA CGCGGAGTCG CGGCCAGCCT GGCGTCGGGG
CTCGATTCGC TGTTCGACGA GCGAGGCACG CTACGTTCTC GGCATCCCGA CCTCCACGCG
CGGATGCGGA CCTATCTCCC GGTCCTGAAA CTCTCGACAG GCTGCGTGAT CGCCGCGCTC
GGCCTTCTGG TCACGCTGCA GCTTTGGGGA GTCAGCGTGT TTGCCTGGTT CGCCGGAACC
ACGCTCGGGC GCCAGATCGC CTCGGCAGTC GTGACCATTG CGGCAGCCAT CCTCATCGCC
CTCATCGTCT GGGAGGCAGC AAACGCCGCG TTGGAAGCTC ACGCCGAGCG TCTGATACGT
CAGGGGCGTC CCGGCCGCGC CGCCCGCTAT CGCACCCTTC TCCCGATGCT CCGATCGGTC
CTCATGGGAG CCATTCTGGT TGTGGTCGCG CTGGTGGTGC TCGGCGCCGT GGGCGTCAAC
ATCACGCTTC TGCTCGGCGG GCTGTCGATC TTCGGGCTCG CCGTCGGCTT CGGCTCGCAA
AAGCTGGTGC AGGACATCAT CACCGGACTT TTCCTGCTCC TGGAAGATGC CGTGCAGGTC
GGAGACTGGG TAACCCTCGC CGGAATTTCC GGCAGCGTCG AGAAACTCTC GATCCGCACC
ATCCGGCTGC GCGCCGGCGA CGGTTCGCTG AACGTGATCC CGTTCAGCGC GGTGAGCACG
GTATCAAATT TCTCACGGGA GTTTTCATTT GCGCCGATCA CGGTCGGCGT TGCCTACAAG
GAGGATATCG ACCGCGTCTT CGCCGTGATC CGGGATGAGT TCACGAAAAT GCGCGCGGAC
CCGGAATGGG CGCCGAATAT TCTCGGCGAT ATCGAACTTT GGGGCCTCGA CCAGTTCGGT
GCCTCCTCGC TCGATATCGT GGGCCGCATG CGCACCCCGG CCGGACAGCA GCATGCGGTA
CGCCGCGAAT TCAACCGCCG CCTCAAAATC CGGTTCGACA CCGAGGGCAT CGAGATACCC
TTCCCCTATC AGCGGCTGAC CATCGATCCG GAAGAATTCC GCGCCGCGTT TGGCTCCGGC
ACTTCAGGTG AGGCACGCCG GCCGCACGAG ACCACGCCGG AGAATGGCTG A
 
Protein sequence
MKRDAPFRGE MFRALSLALP ILALLLGAIP AASAAAPASK ATAAATSPAV KAAPPLTATQ 
IDTAIATLRD AKQRATLIAT LEAMKGGATA ATTQQAAPGI GLGIAQTIEE WAEQTLQGIG
RALSDATDIS LIWHWIEFVA TDAWLRHTVL QATWRLAVVL VAALCAEWVV RRALRQPRTS
LLRNAARRRA ADGPGQEADG AEGIAAAEAG ETERSRRRQP LRRWLRRVPW ALGHFALELV
PVIAFALAGV ALVSGGIADD RVSRLVIGAA LEAYVVSRFA MECARLLLNP RAPEIRLAGL
GDDRARWLTT WLRAIVGTVA FGYAAIATGG LFGLYPAASR VLVKIVSLAV HLMLAVMILQ
ARRPVAAFIR GETPSAGFTG ALRVGLAHTW HILALFYVIA LWVAWAIGVP HAFFIMLRIV
VVLGLVAIIG RGVAASLASG LDSLFDERGT LRSRHPDLHA RMRTYLPVLK LSTGCVIAAL
GLLVTLQLWG VSVFAWFAGT TLGRQIASAV VTIAAAILIA LIVWEAANAA LEAHAERLIR
QGRPGRAARY RTLLPMLRSV LMGAILVVVA LVVLGAVGVN ITLLLGGLSI FGLAVGFGSQ
KLVQDIITGL FLLLEDAVQV GDWVTLAGIS GSVEKLSIRT IRLRAGDGSL NVIPFSAVST
VSNFSREFSF APITVGVAYK EDIDRVFAVI RDEFTKMRAD PEWAPNILGD IELWGLDQFG
ASSLDIVGRM RTPAGQQHAV RREFNRRLKI RFDTEGIEIP FPYQRLTIDP EEFRAAFGSG
TSGEARRPHE TTPENG