| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1478 |
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| Symbol | |
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| ID | 5160475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 1641406 |
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| End bp | 1642149 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640553391 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001234605 |
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| Protein GI | 148260478 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.367389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAACC CGGAAAGCGG CGAACGCGGA GAGCGGATTG CGAAATACCT GGCCCGGGCT
GGCGTGGCGA GCCGACGGGA CGCCGAGCGC ATGATCGAGT CCGGACGGGT CGCTCTCAAC
GGGACGAAGG TTCTGCACCC GGCGACCTTC GTCGCCGCTG GCGACATCAT CCTTATCGAC
GGTAGTCCGG TCGGTGAGCC ATCGCGTACC CGGCTCTGGC GCTACCACAA GCGGGCTGGA
CTGCTGACCA CGCATCGCGA CCCCGAGGGC CGGCCCACGA TCTTCGAGCG GATGCCGCCC
GAATTGCCCC GTGTTGTCAG CGTTGGCCGG CTCGATCTCA ACAGCGAGGG GCTGCTGCTG
CTCACCAATG ACGGCGCCCT CGCCCGGCAA CTGGAACTGC CGACAACCGG CTGGCTGCGC
CGCTACCGTG TACGGGTGCA CGGTACGGTC GACCCCGCCC GCCTGGCGGC GCTGAAGGGC
GGCATCGTGG TGGACGGTGT TCGATATGGT CCGATCTCGG CTGAAATCGA TTCCACGAAG
GGATCGAATT CCTGGCTGGC AGTCGGGCTT AACGAGGGCA AGAACCGCGA GATCCGAAAG
GTCATGGCCG CGCTCGGGCT TGAGACAACG CGACTCATTC GTATCGCCTA TGGCCCGTTC
CAGCTCGGCA ACCTGCCGCG AGGGGCGGTC GCGGAAGTCA ATCCCAAGGT ACTCCGCGAA
CAATTGCCGA AAGTTGGCCG ATGA
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| Protein sequence | MTNPESGERG ERIAKYLARA GVASRRDAER MIESGRVALN GTKVLHPATF VAAGDIILID
GSPVGEPSRT RLWRYHKRAG LLTTHRDPEG RPTIFERMPP ELPRVVSVGR LDLNSEGLLL
LTNDGALARQ LELPTTGWLR RYRVRVHGTV DPARLAALKG GIVVDGVRYG PISAEIDSTK
GSNSWLAVGL NEGKNREIRK VMAALGLETT RLIRIAYGPF QLGNLPRGAV AEVNPKVLRE
QLPKVGR
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