| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1467 |
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| Symbol | |
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| ID | 5160893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 1629352 |
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| End bp | 1631010 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640553380 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_001234594 |
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| Protein GI | 148260467 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase
[COG0703] Shikimate kinase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGACA AGAGTTTTCA TTCACCCGGC CTTCCTGTCG CCTTGCCGAT GCGCAGCATC
GTGCTGATCG GACTGATGGG GGCTGGCAAG TCGGCGGTCG GCCGCCGGCT CGCGGCCCAA
CTGGCCCTGC CGTTTCACGA TTCCGATGCC GAGATTGAGG CGGCCGCGGG CAAGACGGTT
GCGGATATTT TCGCTTCAGA AGGCGAAGCC GCCTTCCGGG CGCGCGAAAG GGCCATGATT
GCCGAGCTTT TGGCCGGTCC GCCGATCGTT CTGGCGACCG GCGGCGGCGC CTTCATGGAC
CCCGAGACCC GCGCAGTGAT TGGCGCGCGG GCCATTTCCG TCTGGCTGCG GGCGACGCTC
GACGTGCTTC TGGCCCGGGT GCGCGGCCGC ACCCATCGGC CACTGCTTAA TCAGGGCGAC
CCTGCCGAAA TCCTGTCCCG GCTTTCCGCG CTGCGTGCGC CGGTCTATGC CGAAGCGGAC
ATCATCGTTG ACAGTACCGA GGCCCCGCCT GACATGACCA CCGAGACCGT TGCCGCTGCC
ATCGCTCGCC ACGCGCCCGA GCGGACCATT CGGATCGAGC TTCCCGATGC CGGCTATGAC
GTGGTGATCG GCCGCGGATT GCTCGATGGC GCGGGTGCCC GTCTCGCCGC AGCCCTGCCG
TCGCGTCGCG CCGTGGTGGT GACCGACGCG AACGTGGCGC AGACACATCT GCCGCGACTC
GAACGCGCGC TTGACGATGC GGGCTTCATC CACGACCGGA TCGTGGTTCC GCCGGGCGAA
GGATCAAAAA GCCTCTCCCG TTTTGCCGCA CTGGTTGAGG ACATTCTTGC CCTGAAGCCG
GAGCGGCAGA CCGCGATCAT CGCGCTTGGC GGCGGCGTCA TCGGCGATCT GGCCGGGTTC
GCTGCTTCCA GCGTGCTGCG CGGGCTGCCC TTCGCGCAGG TTCCGACCTC GCTGCTCGCG
CAGGTTGATT CCAGCGTCGG TGGCAAGACC GGCGTCAATT CGCGCCACGG CAAGAACCTG
ATCGGCGCGT TTCATCAGCC GCGTCTTGTC GTCATCGACA GCGATACGTT GGCCACCCTG
TCGCGGCGCC AGGCCGCCGC AGGCTATGCT GAAATCGTCA AGGCGGGGCT CATCGCCGAT
CCCGCGCTCT ATGAATGGTG CGAAGCCCAT GGCGCCGCGC TGCTTGGTGG CGACCAGGGC
TTGCAGGAAG AGGCGATTGC CCGCGCTGTT GCCTTCAAGG CGCAGGTGGT GATGGCCGAT
CCGCGCGAGC AGGCCAAGCG GGATGGCCGC GCGCTGCTCA ATCTCGGCCA CACTTTCGCT
CACGCCTTCG AGGCCGAGAC CGGTTATGGC GAGGCGCTGC TGCACGGCGA GGCGGTGGCG
ATCGGCATGG TTTGCGCTTT CGACCTCTCG GCCCGTCTTG GTTATTGCGA TGCGGGAATC
GTTCCGCGCA TTGCCGCGCA TCTGGACGAG GTCGGCCTTC CGCACCGGAT CGGCGGCTGG
AACGCGGAAG CGCTGCTCGG CCACATGCAG AGCGATAAGA AGATGCGGGA CGGCAGGCTA
GCCTTCGTTT TGGCCCGTGG GATCGGCAGT GCGTTCACTA GCCGCGAGGT GCCGCAGGAA
GCTGTTCGGG CAACGCTTGC GGCCTGTGGC GCGGGCTGA
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| Protein sequence | MFDKSFHSPG LPVALPMRSI VLIGLMGAGK SAVGRRLAAQ LALPFHDSDA EIEAAAGKTV
ADIFASEGEA AFRARERAMI AELLAGPPIV LATGGGAFMD PETRAVIGAR AISVWLRATL
DVLLARVRGR THRPLLNQGD PAEILSRLSA LRAPVYAEAD IIVDSTEAPP DMTTETVAAA
IARHAPERTI RIELPDAGYD VVIGRGLLDG AGARLAAALP SRRAVVVTDA NVAQTHLPRL
ERALDDAGFI HDRIVVPPGE GSKSLSRFAA LVEDILALKP ERQTAIIALG GGVIGDLAGF
AASSVLRGLP FAQVPTSLLA QVDSSVGGKT GVNSRHGKNL IGAFHQPRLV VIDSDTLATL
SRRQAAAGYA EIVKAGLIAD PALYEWCEAH GAALLGGDQG LQEEAIARAV AFKAQVVMAD
PREQAKRDGR ALLNLGHTFA HAFEAETGYG EALLHGEAVA IGMVCAFDLS ARLGYCDAGI
VPRIAAHLDE VGLPHRIGGW NAEALLGHMQ SDKKMRDGRL AFVLARGIGS AFTSREVPQE
AVRATLAACG AG
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