| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1400 |
|---|
| Symbol | |
|---|
| ID | 5160458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 1555764 |
|---|
| End bp | 1557212 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640553315 |
|---|
| Product | NADH-ubiquinone oxidoreductase, chain 49kDa |
|---|
| Protein accession | YP_001234529 |
|---|
| Protein GI | 148260402 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGTT CGCCCATGCC GCCGCCCTGC TCGGCTGACG CGCCGCCGAT GGTCGACGCC
GCCGGATGGC ACGCGACAGG TGCTGCACTC GCTTCGGGGG AGCGCGTGCT GGTCGCGCTC
TGGGCGGCGC GGGATGATGC GGGGGCGCGC GTTCATCTGG CGACACGGCG GCCCAACGGG
AGCGATCTCG CGGTGATCGC CCTGCGCGCG GAGGACGGTT CCTATCCGTC GATCGGGCGG
CATCATCCGG GGGCGATCCT GATGGAGCGG GCCTTGCAGG ATGCGAGCGG GCTCCGCGCC
GAGGGATTGC CCGATCCGCG CCCCTGGCTC GACCATGAGC GGGACTTCGC CTTCCTGCCC
GCCGAGGGCG AAGGGCTGCA CCGGATACCG GTGGGGCCGA TCCATGCCGG GACGATCGAG
CCGGGCCATT TCCGCTTCAC GGTGAACGGC GAGACGATCG TACGGCTGGA GGCGCGGCTC
GGCTACACGC ACAAGGGCAC GCTCGGGCTG ATGCGGGGAG CGACACCGGA TGCGGCGTTG
CGTCTCGCCG GGCGGGTTTC GGGCGATTCG ACCGTGGCCT ATGCGTGGGC CTTTGCCCGC
GCGGTCGAGG CGGCACTCGG GGTTGTCGTG CCGAAGCGGG CGTCAGTGCT GCGCGGGGTG
ATGGCCGAGC TCGAACGCCT CGCCAATCAT GCCGGCGATT TCGGCGCGAT TTGCAACGAT
GCCGGGTTCC CGCTGATCAA CGCCCATGCC GGCGCGCTGC GCGAGACGAT CCTGCGCCAG
GCCGAGGCCT GCTTCGGCCA CCGGCTGATG ATGGACCGGA TCGTCCCCGG CGGGGTTGCC
GCCGATCTGG CGCCGGCTTC CGCCGCTTCC CTGCTTGCCG AATTGCCGTC CTGGCGCGGG
CGGTTCGAGC GACTGGTCGA ACTCTATGGC AAGACCGCCT CGTTGCAGGA CCGGGTGGTC
GCCGCCGGAA GACTCGCCCC CGACCTTGCC CGCCGCCTCG GCTGCGGCGG CTATGTCGGC
CGCGCCGCGG GGCAGGATTT CGACGCCCGG CGCGATGCGC CCTACCCGCC CTATGACCGC
CATGCGCCCG ACGTGCCCGC GCTTGCGGCC GGCGATGTCG ATGCGCGGGT GCGGATCCGG
ATCGCCGAGA TCCGCGCCAG CGTCGCGCTG ATCGGCGAGT TGCTCGGCGA TCTGCCGGAG
GGCGACATTC GCGCCTCACG GCCGGAGAGC GGTGGCGAGG CGTTCGGCTG CGCGCTGGTG
GAAGGGTTCA GGGGCGATGT CTTCGCCGCG GTGCGGCTGC GCGGCGCGGT GGTGGCGGAT
GCGTTCCTGC GCGATCCGTC GTGGTTTTTC TGGCCGGCGC TGGAAGCGTC GATCGAGGGC
AACATCGTCG CCGACTTCCC ACTCTGCAAC AAGAGCTTCA ACGCCGCCTA TTCGGGGTGC
GACCTTTAA
|
|---|
| Protein sequence | MTGSPMPPPC SADAPPMVDA AGWHATGAAL ASGERVLVAL WAARDDAGAR VHLATRRPNG
SDLAVIALRA EDGSYPSIGR HHPGAILMER ALQDASGLRA EGLPDPRPWL DHERDFAFLP
AEGEGLHRIP VGPIHAGTIE PGHFRFTVNG ETIVRLEARL GYTHKGTLGL MRGATPDAAL
RLAGRVSGDS TVAYAWAFAR AVEAALGVVV PKRASVLRGV MAELERLANH AGDFGAICND
AGFPLINAHA GALRETILRQ AEACFGHRLM MDRIVPGGVA ADLAPASAAS LLAELPSWRG
RFERLVELYG KTASLQDRVV AAGRLAPDLA RRLGCGGYVG RAAGQDFDAR RDAPYPPYDR
HAPDVPALAA GDVDARVRIR IAEIRASVAL IGELLGDLPE GDIRASRPES GGEAFGCALV
EGFRGDVFAA VRLRGAVVAD AFLRDPSWFF WPALEASIEG NIVADFPLCN KSFNAAYSGC
DL
|
|---|
| |