Gene Acry_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1375 
Symbol 
ID5159564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp1530323 
End bp1532257 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content69% 
IMG OID640553291 
ProductFis family GAF modulated sigma54 specific transcriptional regulator 
Protein accessionYP_001234505 
Protein GI148260378 
COG category[K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3284] Transcriptional activator of acetoin/glycerol metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCGT GGGAGTGCCT GCTCTCCGGC GAGGACGGGG ACGGGCAGCG CCGCTTTCCG 
GTGCGGCCGC TGATCGGCGA TTCATGGTCG CGTTGCGCCT CCTGCGGCAT CGATGCGCGG
CAGCGGGAAG CTCCCCTGAA CCACGGCATC GATGCGCTGA TCGAACAGAA CCGGGACCTC
CTCGCGGCGG CTCGGCGCAG CTTCGGCACG ATCGGCCGGC TGCTCGACGG CACCGGCGCG
ATGCTCGTCC TCGCCGACCG CAACGGCGTG CTGATCGATG CGATCGGCGA CCGGCGGACG
CTGCATGACG GCATGGACAT CAACCTCTCG ATCGGCGGCA AATGGACCGA GGATGTCGTC
GGCACCAACG GAATCGGAAC GGCGCTGTGG GCGGGCGCGC CGGTCTTCGT GCATGCGGCC
GAACATTTCT GCGCCGGCAT CAAGAGCTGG ACCTGCGCCG GCGCGCCGAT CCGCGAACCG
TTCGACAACA GCATCATCGG CGTCGTCGAC CTGTCCGGCC ATCCGGACAT CTTCCGGCCG
CACAATATCG GCCTCGTCGC CGCGGCGGCG CAGGAAATCG AGAAGGCGCT CGCCGAGCAG
CGCAACGAGG AGCGCGCGCG GCTGCTGGAG GCATTCATCT CATCCGCGCC CGAATATCGG
CGCAGCGACG GATTGCTGAT CGTCGATCAT CGGGGGCGGC CGATCTATTG CCACAACGTC
GCCGAAAGCA CGCTGCGCGC GTTCCGCACC AACCCGCCGA CGCCGGCGGC GGAGCGGCGC
CTGGTGCGCT TCCTTGAAAG CGGCAACGGC GCCGAACTGG ACAATGACGC GATGCTCGCG
CTGCAGAACT GCCATTTCAG CCCGCTGCAG GCGGATAATG GCATGCGCGG TGCGGCGCTG
GTGTTTCCGA CGCGCGAGGC CCGGCCATCC CCCGCGGCGC GGCGCGCCGA TGCGGATGCC
AGCGACAGCC AGGCCAACTG CATCATCGGC GAAAGCCCGG CGCTGCGGCG TGCGATCGAG
ATCGCCAGCC GGGTGGCGGC GACGGCGGAC GTCACCTCCG TGCTGATCGA GGGGGAAACC
GGCGTCGGCA AGGAACTCTT CACCCGGCTG ATCCACGGCG GCACCCGCCA TCGCTCTGAC
AGCCCGTTCG TGACACTGAA CTGCGGCGCG ATCACACGCG AGCTGTTCGG CAGCGAACTC
TTCGGCCATG TGCCAGGCGC CTTTACCGGC GCGAGCCGGG ACGGCAAGCC GGGCGTGTTC
GAACTCGCGA ATGGCGGCGC GCTCTGCCTC GACGAGATCG GCGAAATGCC ACCCGAGATC
CAGCCCTTCC TGCTCAGGGT GCTGGAGGAA CGGGTTGTCC GGCGCCTCGG CGACAGCCGG
GCCAGGCCGG TGGATGTGCG ACTGATCGCC TCGACGAACC GCGACCTGCG ACAGGAGGTC
GAACAGGGAC GCTTCCGGCG CGACCTGTTC TACCGGATCA GCGCGGTGAC CATTCACGTC
CCGCCGCTGC GCGAGCGCGG CGACGATGTG CTGCTGCTGA TCGAGCATTT CAATTCCCGG
TTCGCAGCAC GCCTCGGCAC GGCCCCGCTG ACGTTCGCCG CGGAGGCGCT CGATATCCTG
CGCGCCTATC GCTGGCCGGG CAATGTGCGC GAATTGCGCA ATCTCGTTGA AAAACTCCAC
ATCCTCTGGC GCGGCACGCG CGTGGGCCCG GAGGACCTGC CGGCGGAATT CCACGCCCGG
CCGGAGGAGG CCGCCCTTTT GCCCGCAACA GCGCCGCGGC CGCACAGCAT CGAGGAAGCC
GAGTGCCAGG CGATCCGCGA CGTGCTGCTC GCGGAAAAGG GGAACCTGAG CCGCGCCGCG
CAGAAGCTCG GAATCTCGCG GCCGACGCTC TACCGGAAGC TCGACCAGTT CGGAATCAGG
CGCGGCTTCG TCTGA
 
Protein sequence
MKAWECLLSG EDGDGQRRFP VRPLIGDSWS RCASCGIDAR QREAPLNHGI DALIEQNRDL 
LAAARRSFGT IGRLLDGTGA MLVLADRNGV LIDAIGDRRT LHDGMDINLS IGGKWTEDVV
GTNGIGTALW AGAPVFVHAA EHFCAGIKSW TCAGAPIREP FDNSIIGVVD LSGHPDIFRP
HNIGLVAAAA QEIEKALAEQ RNEERARLLE AFISSAPEYR RSDGLLIVDH RGRPIYCHNV
AESTLRAFRT NPPTPAAERR LVRFLESGNG AELDNDAMLA LQNCHFSPLQ ADNGMRGAAL
VFPTREARPS PAARRADADA SDSQANCIIG ESPALRRAIE IASRVAATAD VTSVLIEGET
GVGKELFTRL IHGGTRHRSD SPFVTLNCGA ITRELFGSEL FGHVPGAFTG ASRDGKPGVF
ELANGGALCL DEIGEMPPEI QPFLLRVLEE RVVRRLGDSR ARPVDVRLIA STNRDLRQEV
EQGRFRRDLF YRISAVTIHV PPLRERGDDV LLLIEHFNSR FAARLGTAPL TFAAEALDIL
RAYRWPGNVR ELRNLVEKLH ILWRGTRVGP EDLPAEFHAR PEEAALLPAT APRPHSIEEA
ECQAIRDVLL AEKGNLSRAA QKLGISRPTL YRKLDQFGIR RGFV