Gene Acry_1343 details

Gene Information

• Locus tag: Acry_1343
• ID: 5159696
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 1498776
• End bp: 1499234
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640553259
• Product: large conductance mechanosensitive channel protein
• Protein accession: YP_001234473
• Protein GI: 148260346
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.954232
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGAGT CGTTCAAGCC AAAACGGCCC GCCTGGGTCG ATGACTTCAA GGCCTTCCTG 
ATGCGCGGCA ACGTGGTCGA TCTGGCCGTC GCCGTGGTCA TCGGCGCCGC GTTTTCCAAT 
ATCGTCAAGA GTTTCGTCGC CGACATCATC AACCCGGTCA TCGGCCTGCT GACCGGCGGG 
GTCGATTTCT CGAACCATTT CATCACGCTG AAGGGCGCGG CCGAACCCAC CCTCGCCGCG 
GCGAAGAAGG CCGGCGCCGT CACGCTGAAC TACGGCGCCT TCGTCAACAC GCTGTTCAAC 
TTCCTGATCG TCGGCTTCGC GATCTTCTGG ATGGTCCGCC TGATCAGCAA GCTGCACAAG 
GCGCCGGAAC CGGCCCCTTC CGCCCCCCCG GCGCCAACGC CGACCGAACT TCTCCTCACC 
GAAATCCGCG ACCTGCTGAA GGATCGCGGC GCGAGCTGA 

 

Protein sequence

MSESFKPKRP AWVDDFKAFL MRGNVVDLAV AVVIGAAFSN IVKSFVADII NPVIGLLTGG 
VDFSNHFITL KGAAEPTLAA AKKAGAVTLN YGAFVNTLFN FLIVGFAIFW MVRLISKLHK 
APEPAPSAPP APTPTELLLT EIRDLLKDRG AS