| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1328 |
|---|
| Symbol | |
|---|
| ID | 5160175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 1484503 |
|---|
| End bp | 1485717 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640553244 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_001234458 |
|---|
| Protein GI | 148260331 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000691779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC CGATACCCAA TTCCCTGCGC ACCCTGCCCG ACGACCGCGG CCGCTTCGGC
GAGTTCGGCG GCAGGTTCGT CGCCGAAACC CTGATGCCGC TGATCCTCGA GCTCGAGGCG
GCCTACGAGG CGGCGAAGGA CGATCCCGAT TTCATGCGGG AATTCCAGTA TTACCTGCAA
CATTATGTCG GCCGCCCCAG CCCGCTCTGG TTCGCCGAGC GGCTGACGAA AGAGCTCGGC
GGCGCCAAGG TCTATTTCAA GCGCGACGAG CTGAACCACA CCGGCGCGCA CAAGATCAAC
AACTGCATCG GCCAGATCCT GCTCGCCAAG CGCATGGGCA AGACGCGCAT CATCGCCGAG
ACCGGCGCCG GCCAGCACGG CGTCGCCACC GCGACGGTGG CCGCCCTCTT CGGCCTGCCC
TGCATCGTCT ACATGGGCGC CACCGATGTC GAGCGGCAGC AGCCCAACGT CTTCCGCATG
AAGCTGCTCG GCGCCGAGGT CCGCCCCGTG ACCTCCGGCG CGTCGACGCT GAAGGACGCG
ATGAACGAGG CGCTGCGCGA CTGGGTCGCG AATGTGCGCG ACACCTTCTA CATCATCGGC
ACCGCCGCCG GCCCGCACCC CTATCCCGCC ATGGTGCGGG ACTTCCAGTC GGTCATCGGG
GTCGAGGCCC GCGCCCAGAT GATGGAGGCC GAGGGCCGCC TGCCGGATGT CGCGATCGCG
GCGATCGGCG GCGGCTCCAA CGCCATCGGC CTGTTCCACG CCTTCCTCGA CGAGCAGGTG
AAGCTGATCG GCGTCGAGGC CGCCGGGCGC GGCCTCGATT CGGGCGAGCA CGCCGCCTCC
CTCTCGCGCG GCCGCCCCGG CGTGCTGCAC GGCAACCGCA CCTACCTGCT GCAGGACGAT
GACGGCCAGA TCCTCGAGGC CCACTCGATC TCCGCCGGGC TCGACTATCC GGGCATCGGC
CCCGAGCATT CCTACCTGCA CGATATCGGC CGCGTGGAAT ACGTGTCCGC GACCGACGAC
GAGGCCCTCG CCGCCTTCCA GCTCTGCTGC CGCACCGAGG GCATCATCCC CGCCCTCGAG
CCCTCGCACG CCCTCGCCCA TGTCGCGAAG ATCGCCCCCG GCATGGACAA GGAGAGCATC
ATCCTGATGA ATCTCTGCGG CCGCGGCGAC AAGGACATCT TCACCGTCGC CCGCCATCTC
GGAGAACAGA TTTGA
|
|---|
| Protein sequence | MNKPIPNSLR TLPDDRGRFG EFGGRFVAET LMPLILELEA AYEAAKDDPD FMREFQYYLQ
HYVGRPSPLW FAERLTKELG GAKVYFKRDE LNHTGAHKIN NCIGQILLAK RMGKTRIIAE
TGAGQHGVAT ATVAALFGLP CIVYMGATDV ERQQPNVFRM KLLGAEVRPV TSGASTLKDA
MNEALRDWVA NVRDTFYIIG TAAGPHPYPA MVRDFQSVIG VEARAQMMEA EGRLPDVAIA
AIGGGSNAIG LFHAFLDEQV KLIGVEAAGR GLDSGEHAAS LSRGRPGVLH GNRTYLLQDD
DGQILEAHSI SAGLDYPGIG PEHSYLHDIG RVEYVSATDD EALAAFQLCC RTEGIIPALE
PSHALAHVAK IAPGMDKESI ILMNLCGRGD KDIFTVARHL GEQI
|
|---|
| |