| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1317 |
|---|
| Symbol | |
|---|
| ID | 5159825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 1471857 |
|---|
| End bp | 1473383 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640553233 |
|---|
| Product | protease Do |
|---|
| Protein accession | YP_001234447 |
|---|
| Protein GI | 148260320 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.278198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGT TCCTCGCCCG CCGCCGGCCC GGGCAGCTCG CTGCCCTCAC CGCCGTCATG
CTGGCCGGCG GCACGCTTGC CGCGATTTCG CTCGACAGCG CCTTCGCCAA CGACAAGGCG
TTCGACGCCA CGTCGAAAGT CCAGAAGGAC TTCAAGCCGA TCCCGAGCTT CGCCCCCCTG
GTCAAGGACG TCAGCCCCGC GGTCGTCTCG GTGACCGTGC ATCTCAAGGT CCAGCAGGCC
GACAACACGC AGGCGCAGAA CGGCATGCCG CCCGGCATGC CCTTCGCCTT CCCCTTCCCC
TTTCCGCAGC CGCAGCAGCC CCAGGCCGTG GAAGCCAAGG GCTCGGGCTT CTTCATCTCG
TCCGACGGCT ACATCGTGAC CAACAATCAC GTGGTGAAGA ACGCGAAGTC GGTCTTCGTC
ACGCTGTCCG ACGGATCGAA GCTGCCGGCC AAGATCGTCG GCACCGACCC GAGCACCGAT
CTCGCGGTGC TCAAGGTCAA GCGCGACAAG CCCTTCCCCT ACCTGCAGCT CGGCGACTCG
GCGAAGGTCG TGCCCGGCCA GTGGGTGATC GCGATCGGCA ACCCGTTCGG CCTCGCCGAA
ACGGTGACGA CCGGCGTCGT CTCCGCCCTC GGCCGCGACA TCGGCGACGG CCAGTACGAC
AGCTTCATCC AGATCGACGC GCCGATCAAC GAGGGCAATT CCGGCGGCCC GCTGCTCAAC
CAGCGCGGCG AGGTCATCGG CGTGAACACC GCGATCCTCA CGCCGTCCGG CGGCTCGGTC
GGGATCGGCT TCTCGATCCC CTCCGACATG GTCAGGCGGA TCGCCGACGA GCTGATCAAG
TCCGGCCACG TCACCCGCGG CTTCATCGGC GTGCAGGTGC AGACGATCAC GCCGGAAATG
GCCCAGGCCA TGGGCGTTCC CGTGCATGAC GGCCGCGCCG ACGGCGCGCT GATCGCCGAG
ACCATGCCGA ACGGGCCGGC GGCCAAGGCC GGCCTGAAGC CCGGCGACAT CATCACCAAG
GTCGATGGCA AGATGGTGCG CGACCCGCGC GAACTCGCCC TCGCCATCTC CGGCATCAAG
CCGGACGGCA AGGCCAGCAT CACCTATCTG CGCGGCGGCG CGTCGCACGA GCTGAACCTG
CGCGTCGAGA AGATGCCGGC CAATGCCGAG GCGGCGTTCG CGCCGGGCGG CAGCCAGAGC
GGCCCGGCCA TGCACAAGCC GGAACTCGGC CTCTCCCTCG CCCCGCTGAG CGATGCCGCC
CGTCAGCAGC TCAACCTGCC GGACAATGTC TCGGGCGCGC TGATCGCCCA TGTCGCGCCG
AACTCCCCGG CCGACGAGGC CGGGCTGCGC TCGGGTGACG TCATCGTCGG CGTCGGCAGC
ATGACGGTGA ACAACCCCGA CCAGGCGGTC GCCGCGATCC GCAAGGCCGA AGCCGCGAAG
GCGAAGGCGA TCGCGCTGCG GGTGATGCGC GGCAACCAGG CCCTGTTCGT CGCGGTGCCG
CTGCCCAAGG AAAAGGCCGG CAAGTAA
|
|---|
| Protein sequence | MKLFLARRRP GQLAALTAVM LAGGTLAAIS LDSAFANDKA FDATSKVQKD FKPIPSFAPL
VKDVSPAVVS VTVHLKVQQA DNTQAQNGMP PGMPFAFPFP FPQPQQPQAV EAKGSGFFIS
SDGYIVTNNH VVKNAKSVFV TLSDGSKLPA KIVGTDPSTD LAVLKVKRDK PFPYLQLGDS
AKVVPGQWVI AIGNPFGLAE TVTTGVVSAL GRDIGDGQYD SFIQIDAPIN EGNSGGPLLN
QRGEVIGVNT AILTPSGGSV GIGFSIPSDM VRRIADELIK SGHVTRGFIG VQVQTITPEM
AQAMGVPVHD GRADGALIAE TMPNGPAAKA GLKPGDIITK VDGKMVRDPR ELALAISGIK
PDGKASITYL RGGASHELNL RVEKMPANAE AAFAPGGSQS GPAMHKPELG LSLAPLSDAA
RQQLNLPDNV SGALIAHVAP NSPADEAGLR SGDVIVGVGS MTVNNPDQAV AAIRKAEAAK
AKAIALRVMR GNQALFVAVP LPKEKAGK
|
|---|
| |